#---------------------------------------------------- #Date Time : 05/11/2016 13:08:48 #-N : SRR097856 #-i : #-j : #-ij : /Users/azofeifa/bidirectional_hits_all/bedgraph_files_mouse/SRR097856.fastqbowtie2.sorted.BedGraph #-k : /Users/azofeifa/bidirectional_hits_all/EMG_out_files_mouse/SRR097856-1_prelim_bidir_hits.bed #-o : /Users/azofeifa/bidirectional_hits_all/EMG_out_files_mouse/ #-ns : 100 #-br : 15 #-bct : 1.0 #-elon : 0 #-pad : 2000 #-minK : 1 #-maxK : 1 #-ms_pen : 1 #-mi : 2000 #-ct : 0.0001 #-rounds : 32 #-ALPHA_0 : 10 #-BETA_0 : 10 #-BETA_1 : 100 #-ALPHA_2 : 1 #-ALPHA_3 : 100 #---------------------------------------------------- chr1 4857462 4857982 ME_60|4857722.471814,89.982506,170.260425,0.443631,97.755561,0.809025,0.076858,0.033922,4859962.000000,4855535.000000 chr1 9544966 9545498 ME_38|9545232.520327,100.314608,165.342212,0.444226,104.888499,0.729086,0.034405,0.174052,9547507.000000,9543065.000000 chr1 9943337 9944107 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