#---------------------------------------------------- #Date Time : 05/11/2016 19:38:46 #-N : SRR930707 #-i : #-j : #-ij : /Users/azofeifa/bidirectional_hits_all/bedgraph_files_mouse/SRR930707.fastqbowtie2.sorted.BedGraph #-k : /Users/azofeifa/bidirectional_hits_all/EMG_out_files_mouse/SRR930707-1_prelim_bidir_hits.bed #-o : /Users/azofeifa/bidirectional_hits_all/EMG_out_files_mouse/ #-ns : 100 #-br : 15 #-bct : 1.0 #-elon : 0 #-pad : 2000 #-minK : 1 #-maxK : 1 #-ms_pen : 1 #-mi : 2000 #-ct : 0.0001 #-rounds : 32 #-ALPHA_0 : 10 #-BETA_0 : 10 #-BETA_1 : 100 #-ALPHA_2 : 1 #-ALPHA_3 : 100 #---------------------------------------------------- chr1 9942484 9942617 ME_25|9942550.990067,27.179103,38.953049,0.118966,22.828705,0.981714,0.012008,0.001688,9945869.000000,9940437.000000 chr1 24615979 24616264 ME_26|24616122.147293,29.503494,113.310165,0.024787,151.409650,0.378237,0.000099,0.621369,24619274.000000,24613782.000000 chr1 34434845 34434921 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ME_339|117772547.582856,74.488870,131.591568,0.630978,206.010394,0.354828,0.625456,0.004929,117774664.000000,117770373.000000 chr7 118153021 118153486 ME_326|118153253.607127,76.612479,155.896982,0.587576,250.000000,0.909977,0.017997,0.021638,118155545.000000,118150983.000000 chr7 119935038 119935369 ME_333|119935203.810441,57.978681,107.403006,0.661774,16.200466,0.942427,0.010710,0.017638,119937305.000000,119932293.000000 chr7 120917441 120917553 ME_314,ME_312|120917497.445645,23.706548,32.147371,0.923123,27.473156,0.369804,0.000348,0.000336,120922055.000000,120914403.000000 chr7 120918748 120918908 ME_314,ME_312|120918828.643411,27.115808,52.537494,0.048391,22.125328,0.626808,0.000341,0.000350,120922055.000000,120914403.000000 chr7 122628297 122628458 ME_322|122628378.165787,32.062088,48.543249,0.915031,234.553850,0.770758,0.226090,0.000788,122630689.000000,122625153.000000 chr7 126591460 126591865 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