#---------------------------------------------------- #Date Time : 05/11/2016 19:40:18 #-N : SRR930716 #-i : #-j : #-ij : /Users/azofeifa/bidirectional_hits_all/bedgraph_files_mouse/SRR930716.fastqbowtie2.sorted.BedGraph #-k : /Users/azofeifa/bidirectional_hits_all/EMG_out_files_mouse/SRR930716-1_prelim_bidir_hits.bed #-o : /Users/azofeifa/bidirectional_hits_all/EMG_out_files_mouse/ #-ns : 100 #-br : 15 #-bct : 1.0 #-elon : 0 #-pad : 2000 #-minK : 1 #-maxK : 1 #-ms_pen : 1 #-mi : 2000 #-ct : 0.0001 #-rounds : 32 #-ALPHA_0 : 10 #-BETA_0 : 10 #-BETA_1 : 100 #-ALPHA_2 : 1 #-ALPHA_3 : 100 #---------------------------------------------------- chr1 9942370 9942805 ME_4|9942588.062792,76.286879,140.911323,0.408061,8.410948,0.895320,0.018455,0.032896,9945120.000000,9940603.000000 chr1 24615952 24616293 ME_11|24616123.023781,82.003092,88.731284,0.058236,216.504275,0.293525,0.000193,0.705701,24619185.000000,24613753.000000 chr1 99314903 99315341 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