DBNascent | Samples

SRR10582201 Sample ID 725

**Data sources**
Paper identifier	Fan2020drb
SRP accession	SRP234556
GEO accession	GSE141373
Samples	SRR10582201

**Technical details**
QC score	2
Replicate	1
Protocol	PRO-seq
Library prep	random primed
Spike-in	None
Single/Paired end	single
Raw strandedness	reverse
Reverse complemented?	True
Mapped strandedness	forward
Timecourse	True
Control/Experimental	control
Wildtype & Untreated?	True
Outlier	No
Unusable	No

**Downloads**
TDF visualization file	TDF file	80 Mb
Stranded gene read counts	TXT file	1 Mb
Unstranded bidirectional read counts	TXT file	21 Mb
Tfit bidirectional regions	BED file	1 Mb
dREG bidirectional regions	BED file	740 Kb
All data files	ZIP archive

**Cellular details**
Organism	H. sapiens
Sample type	cell line
Cell type	MV4-11
Clone/Individual
Strain
Genotype
Construct

**Conditions and treatments**
Condition type	Treatment	Start time	End time	Duration
vehicle	DMSO	-4 hr	0 hr	4 hr

**Extended notes**
Pipeline info and software versions
Sample notes
Analysis notes

**Sample metrics**
Sample QC score	2
Sample NRO score	5
Raw read length	150
Read depth after trimming	47,332,303
Duplication proportion	0.60681
Proportion reads mapped	0.7455
Exon/intron ratio	38.5252
Unique read proportion	0.48289

**Bidirectionals**
Total # Tfit bidirectionals	14030
# Promoter Tfit bidirectionals	4297
# Intronic Tfit bidirectionals	6860
# Intergenic Tfit bidirectionals	881
Total # dREG bidirectionals	17015
# Promoter dREG bidirectionals	4066
# Intronic dREG bidirectionals	7971
# Intergenic dREG bidirectionals	1333
Part of Tfit master merge?	False
Part of dREG master merge?	False