Archive | Azofeifa et al. (2018)

 

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Sample name Paper identifier Organism Protocol Cell type Treatment Equivalent DBNascent sample
ERR769522_1 Laitem2015 human GRO-seq HeLa DRB ERR769522
ERR769522_2 Laitem2015 human GRO-seq HeLa DRB ERR769522
ERR769523_1 Laitem2015 human GRO-seq HeLa KM05382 ERR769523
ERR769523_2 Laitem2015 human GRO-seq HeLa KM05382 ERR769523
ERR769524_1 Laitem2015 human GRO-seq HeLa DRB_control ERR769524
ERR769524_2 Laitem2015 human GRO-seq HeLa DRB_control ERR769524
ERR769525_1 Laitem2015 human GRO-seq HeLa KM_control ERR769525
ERR769525_2 Laitem2015 human GRO-seq HeLa KM_control ERR769525
SRR014283 Core2008 human GRO-seq IMR90 na SRZ014283
SRR014284 Core2008 human GRO-seq IMR90 na SRZ014283
SRR014285 Core2008 human GRO-seq IMR90 na SRZ014283
SRR014286 Core2008 human GRO-seq IMR90 na SRZ014286
SRR014287 Core2008 human GRO-seq IMR90 na SRZ014286
SRR065240 Escoubet-Lozach2011 mouse GRO-seq ThioMac none SRR065240
SRR065241 Escoubet-Lozach2011 mouse GRO-seq ThioMac KLA_1h SRR065241
SRR091798 Ji2011 mouse GRO-seq C2C12 none SRR091798
SRR097854 Min2011 mouse GRO-seq ESC na SRZ097854
SRR097855 Min2011 mouse GRO-seq ESC na SRZ097854
SRR097856 Min2011 mouse GRO-seq ESC na SRZ097854
SRR097857 Min2011 mouse GRO-seq ESC na SRZ097854
SRR097858 Min2011 mouse GRO-seq ESC na SRZ097858
SRR097859 Min2011 mouse GRO-seq ESC na SRZ097858
SRR097860 Min2011 mouse GRO-seq ESC na SRZ097858
SRR097861 Min2011 mouse GRO-seq ESC na SRZ097858
SRR097862 Min2011 mouse GRO-seq ESC na SRR097862
SRR097863 Min2011 mouse GRO-seq MEF na SRR097863
SRR097864 Min2011 mouse GRO-seq MEF na SRR097864
SRR1015583 Luo2014 human GRO-seq AC16 vehicle SRR1015583
SRR1015584 Luo2014 human GRO-seq AC16 vehicle SRR1015584
SRR1015585 Luo2014 human GRO-seq AC16 TNFa_10min SRR1015585
SRR1015586 Luo2014 human GRO-seq AC16 TNFa_10min SRR1015586
SRR1015587 Luo2014 human GRO-seq AC16 TNFa_30min SRR1015587
SRR1015588 Luo2014 human GRO-seq AC16 TNFa_30min SRR1015588
SRR1015589 Luo2014 human GRO-seq AC16 TNFa_120min SRR1015589
SRR1015590 Luo2014 human GRO-seq AC16 TNFa_120min SRR1015590
SRR1015591 Luo2014 human GRO-seq AC16 control_notvechicle SRR1015591
SRR1015592 Luo2014 human GRO-seq AC16 control_notvechicle SRR1015592
SRR1015593 Luo2014 human GRO-seq AC16 a-amanitin_15min SRR1015593
SRR1015594 Luo2014 human GRO-seq AC16 a-amanitin_15min SRR1015594
SRR1035898 Kaikkonen2014 human GRO-seq HUVEC control_2hr SRR1035898
SRR1035899 Kaikkonen2014 human GRO-seq HUVEC VEGFA_2hr SRR1035899
SRR1035900 Kaikkonen2014 human GRO-seq HAEC control_2hr SRR1035900
SRR1035901 Kaikkonen2014 human GRO-seq HAEC VEGFA_2hr SRR1035901
SRR1041870 Miller2015 human GRO-seq A549 control SRR1041870
SRR1041871 Miller2015 human GRO-seq A549 control SRR1041871
SRR1041872 Miller2015 human GRO-seq A549 siSetx SRR1041872
SRR1041873 Miller2015 human GRO-seq A549 siSetx SRR1041873
SRR1105736 Allen2014 human GRO-seq HCT116 DMSO_1hr SRR1105736
SRR1105737 Allen2014 human GRO-seq HCT116 DMSO_1hr SRR1105737
SRR1105738 Allen2014 human GRO-seq HCT116 Nutlin_1hr SRR1105738
SRR1105739 Allen2014 human GRO-seq HCT116 Nutlin_1hr SRR1105739
SRR1105740 Allen2014 human GRO-seq p53HCT116 DMSO_1hr SRR1105740
SRR1105741 Allen2014 human GRO-seq p53HCT116 Nutlin_1hr SRR1105741
SRR1145801 Wang2015a human GRO-seq CyT49_undifferentiated_hESC none SRR1145801
SRR1145808 Wang2015a human GRO-seq CyT49_definitive_endoderm none SRR1145808
SRR1145815 Wang2015a human GRO-seq CyT49_primitive_gut_tube none SRR1145815
SRR1145822 Wang2015a human GRO-seq CyT49_posterior_foregut none SRR1145822
SRR1145829 Wang2015a human GRO-seq CyT49_pancreatic_endoderm none SRR1145829
SRR1192053 Jin2014 human GRO-seq LNCap DMSO_2hr+DHT_1hr SRR1192053
SRR1192054 Jin2014 human GRO-seq LNCap DMSO_2hr+Etoh_1hr SRR1192054
SRR1192055 Jin2014 human GRO-seq LNCap SD70_2hr+DHT_1hr SRR1192055
SRR1192056 Jin2014 human GRO-seq LNCap SD70_2hr+Etoh_1hr SRR1192056
SRR1219737 Sigova2013 human GRO-seq H1 Activin_48hr SRR1219737
SRR122339 Wang2011 human GRO-seq LNCaP vehicle-siCTRL SRR122339
SRR122340 Wang2011 human GRO-seq LNCaP dht-siCTRL SRR122340
SRR122341 Wang2011 human GRO-seq LNCaP dht-siFoxA1 SRR122341
SRR1224573 Allen2014 human GRO-seq HCT116 DMSO_30min SRR1224573
SRR1224574 Allen2014 human GRO-seq HCT116 Nutlin_30min SRR1224574
SRR1233867 Step2014 mouse GRO-seq 3T3-L1_adipocyte none SRR1233867
SRR1233868 Step2014 mouse GRO-seq 3T3-L1_adipocyte Biomol-DMSO_10min SRR1233868
SRR1233869 Step2014 mouse GRO-seq 3T3-L1_adipocyte Biomol-DMSO_30min SRR1233869
SRR1233870 Step2014 mouse GRO-seq 3T3-L1_adipocyte Biomol-DMSO_1hr SRR1233870
SRR1233871 Step2014 mouse GRO-seq 3T3-L1_adipocyte Biomol-DMSO_3hr SRR1233871
SRR1233872 Step2014 mouse GRO-seq 3T3-L1_adipocyte none SRR1233872
SRR1233873 Step2014 mouse GRO-seq 3T3-L1_adipocyte Biomol-DMSO_10min SRR1233873
SRR1233874 Step2014 mouse GRO-seq 3T3-L1_adipocyte Biomol-DMSO_30min SRR1233874
SRR1233875 Step2014 mouse GRO-seq 3T3-L1_adipocyte Biomol-DMSO_1hr SRR1233875
SRR1233876 Step2014 mouse GRO-seq 3T3-L1_adipocyte Biomol-DMSO_3hr SRR1233876
SRR1275489 Tan2014 human GRO-seq A375 DMSO_48hr SRR1275489
SRR1275490 Tan2014 human GRO-seq A375 DMSO_48hr SRR1275490
SRR1275491 Tan2014 human GRO-seq A375 Leflunomide_48hr SRR1275491
SRR1275492 Tan2014 human GRO-seq A375 Leflunomide_48hr SRR1275492
SRR1275493 Tan2014 human GRO-seq A375 A771726_48hr SRR1275493
SRR1275494 Tan2014 human GRO-seq A375 A771726_48hr SRR1275494
SRR1297231 Wei2015 mouse GRO-seq BlackSwiss none SRR1297231
SRR1297232 Wei2015 mouse GRO-seq BlackSwiss_RBFox2-KO none SRR1297232
SRR1297233 Wei2015 mouse GRO-seq MEF none SRR1297233
SRR1297234 Wei2015 mouse GRO-seq MEF none SRR1297234
SRR1297235 Wei2015 mouse GRO-seq MEF siRBFox2 SRR1297235
SRR1297236 Wei2015 mouse GRO-seq MEF siRBFox2 SRR1297236
SRR1297237 Wei2015 mouse GRO-seq MEF siSUZ12 SRR1297237
SRR1297238 Wei2015 mouse GRO-seq MEF siSUZ12 SRR1297238
SRR1342250 Gardini2014 human GRO-seq HeLa EGF_20min SRR1342250
SRR1342251 Gardini2014 human GRO-seq HeLa EGF_20min_shRNA_Integrator SRR1342251
SRR1342252 Gardini2014 human GRO-seq HeLa EGF_20min SRR1342252
SRR1342253 Gardini2014 human GRO-seq HeLa EGF_20min_shRNA_Integrator SRR1342253
SRR1406747 Kaikkonen2014 human GRO-seq HUVEC control_2hr SRR1406747
SRR1406748 Kaikkonen2014 human GRO-seq HUVEC VEGFA_2hr SRR1406748
SRR1482436 Williams2015 mouse GRO-seq C2 none SRZ1482436
SRR1482437 Williams2015 mouse GRO-seq C2 none SRZ1482436
SRR1482438 Williams2015 mouse GRO-seq C2 none SRZ1482436
SRR1482439 Williams2015 mouse GRO-seq C2 none SRZ1482436
SRR1482440 Williams2015 mouse GRO-seq C2 none SRZ1482436
SRR1482441 Williams2015 mouse GRO-seq C2 none SRZ1482441
SRR1482442 Williams2015 mouse GRO-seq C2 none SRZ1482441
SRR1482443 Williams2015 mouse GRO-seq C2 none SRZ1482441
SRR1482444 Williams2015 mouse GRO-seq C2 none SRZ1482441
SRR1501091 Leveille2015 human GRO-seq MCF7 DMSO_12hr SRR1501091
SRR1501092 Leveille2015 human GRO-seq MCF7 DMSO_12hr SRR1501092
SRR1501093 Leveille2015 human GRO-seq MCF7 Nutlin_12hr SRR1501093
SRR1501094 Leveille2015 human GRO-seq MCF7 Nutlin_12hr SRR1501094
SRR1517780 Fang2014 mouse GRO-seq Liver zt_1hr SRR1517780
SRR1517781 Fang2014 mouse GRO-seq Liver zt_4hr SRR1517781
SRR1517782 Fang2014 mouse GRO-seq Liver zt_7hr SRR1517782
SRR1517783 Fang2014 mouse GRO-seq Liver zt_10hr SRR1517783
SRR1517784 Fang2014 mouse GRO-seq Liver zt_13hr SRR1517784
SRR1517785 Fang2014 mouse GRO-seq Liver zt_16hr SRR1517785
SRR1517786 Fang2014 mouse GRO-seq Liver zt_19hr SRR1517786
SRR1517787 Fang2014 mouse GRO-seq Liver zt_22hr SRR1517787
SRR1517788 Fang2014 mouse GRO-seq Liver zt_10hr SRR1517788
SRR1517789 Fang2014 mouse GRO-seq Liver zt_22hr SRR1517789
SRR1517790 Fang2014 mouse GRO-seq Liver_Rev-erba-wt zt_10hr SRR1517790
SRR1517791 Fang2014 mouse GRO-seq Liver_Rev-erba-KO zt_10hr SRR1517791
SRR1519032 Franco2015 human GRO-seq MCF7 vehicle_40min SRR1519032
SRR1519033 Franco2015 human GRO-seq MCF7 vehicle_40min SRR1519033
SRR1519034 Franco2015 human GRO-seq MCF7 vehicle_40min SRR1519034
SRR1519035 Franco2015 human GRO-seq MCF7 E2_40min SRR1519035
SRR1519036 Franco2015 human GRO-seq MCF7 E2_40min SRR1519036
SRR1519037 Franco2015 human GRO-seq MCF7 E2_40min SRR1519037
SRR1519038 Franco2015 human GRO-seq MCF7 TNFa_40min SRR1519038
SRR1519039 Franco2015 human GRO-seq MCF7 TNFa_40min SRR1519039
SRR1519040 Franco2015 human GRO-seq MCF7 TNFa_40min SRR1519040
SRR1519041 Franco2015 human GRO-seq MCF7 E2_TNFa_40min SRR1519041
SRR1519042 Franco2015 human GRO-seq MCF7 E2_TNFa_40min SRR1519042
SRR1519043 Franco2015 human GRO-seq MCF7 E2_TNFa_40min SRR1519043
SRR1542320 Liu2014 human GRO-seq MCF7 siCTL_vehicle SRR1542320
SRR1542321 Liu2014 human GRO-seq MCF7 siCTL_E2 SRR1542321
SRR1542322 Liu2014 human GRO-seq MCF7 siGATA3_vehicle SRR1542322
SRR1542323 Liu2014 human GRO-seq MCF7 siGATA3_E2 SRR1542323
SRR1542324 Liu2014 human GRO-seq MCF7 shCTL_vehicle SRR1542324
SRR1542325 Liu2014 human GRO-seq MCF7 shCTL_RA SRR1542325
SRR1542326 Liu2014 human GRO-seq MCF7 shCTL_E2 SRR1542326
SRR1542327 Liu2014 human GRO-seq MCF7 shRARs_vehicle SRR1542327
SRR1542328 Liu2014 human GRO-seq MCF7 shRARs_RA SRR1542328
SRR1542329 Liu2014 human GRO-seq MCF7 shRARs_E2 SRR1542329
SRR1542330 Liu2014 human GRO-seq MCF7 shCTL_vehicle SRR1542330
SRR1542331 Liu2014 human GRO-seq MCF7 shCTL_E2 SRR1542331
SRR1542332 Liu2014 human GRO-seq MCF7 shAP2g_vehicle SRR1542332
SRR1542333 Liu2014 human GRO-seq MCF7 shAP2g_E2 SRR1542333
SRR1544604 Nojima2015 human NET-seq HeLa none SRR1544604
SRR1544605 Nojima2015 human NET-seq HeLa none SRR1544605
SRR1544606 Nojima2015 human NET-seq HeLa none SRR1544606
SRR1544608 Nojima2015 human NET-seq HeLa siLuc SRR1544608
SRR1544609 Nojima2015 human NET-seq HeLa siCPSF73 SRR1544609
SRR1544610 Nojima2015 human NET-seq HeLa siCstF64+siCstF64tau SRR1544610
SRR1544611 Nojima2015 human NET-seq HeLa siXrn2 SRR1544611
SRR1552315 Nojima2015 human NET-seq HeLa none SRR1552315
SRR1552316 Nojima2015 human NET-seq HeLa none SRR1552316
SRR1552480 Core2014 human GRO-cap K562 na SRR1552480
SRR1552481 Core2014 human GRO-cap K562 na SRR1552481
SRR1552482 Core2014 human GRO-cap GM12878 na SRR1552482
SRR1552483 Core2014 human GRO-cap GM12878 na SRR1552483
SRR1552484 Core2014 human GRO-seq K562 na SRR1552484
SRR1552485 Core2014 human GRO-seq GM12878 na SRR1552485
SRR1554311 Core2014 human PRO-seq K562 na SRZ1554311
SRR1554312 Core2014 human PRO-seq K562 na SRZ1554311
SRR1560531 Hah2015 mouse GRO-seq bone_marrow_macrophage none SRR1560531
SRR1560532 Hah2015 mouse GRO-seq bone_marrow_macrophage none SRR1560532
SRR1560533 Hah2015 mouse GRO-seq bone_marrow_macrophage LPS_20min SRR1560533
SRR1560534 Hah2015 mouse GRO-seq bone_marrow_macrophage LPS_20min SRR1560534
SRR1560535 Hah2015 mouse GRO-seq bone_marrow_macrophage LPS_60min SRR1560535
SRR1560536 Hah2015 mouse GRO-seq bone_marrow_macrophage LPS_60min SRR1560536
SRR1560537 Hah2015 mouse GRO-seq bone_marrow_macrophage LPS_180min SRR1560537
SRR1560538 Hah2015 mouse GRO-seq bone_marrow_macrophage LPS_180min SRR1560538
SRR1574538 Chen2014 human GRO-seq HeLa siCtrl SRR1574538
SRR1574539 Chen2014 human GRO-seq HeLa siSsu72 SRR1574539
SRR1575914 Mayer2015 human NET-seq HeLaS3 none SRZ1575914
SRR1575915 Mayer2015 human NET-seq HeLaS3 none SRZ1575914
SRR1575916 Mayer2015 human NET-seq HeLaS3 none SRZ1575914
SRR1575917 Mayer2015 human NET-seq HeLaS3 none SRZ1575914
SRR1575918 Mayer2015 human NET-seq HeLaS3 none SRZ1575914
SRR1575919 Mayer2015 human NET-seq HeLaS3 none SRZ1575919
SRR1575920 Mayer2015 human NET-seq HeLaS3 none SRZ1575919
SRR1575921 Mayer2015 human NET-seq HEK293T none
SRR1575922 Mayer2015 human NET-seq HEK293T none
SRR1575923 Mayer2015 human NET-seq HEK293T none SRZ1575923
SRR1575924 Mayer2015 human NET-seq HEK293T none SRZ1575923
SRR1575925 Mayer2015 human NET-seq HEK293T none SRZ1575923
SRR1575926 Mayer2015 human NET-seq HEK293T none SRZ1575923
SRR1575927 Mayer2015 human NET-seq HEK293T none SRZ1575923
SRR1575928 Mayer2015 human NET-seq HEK293T none SRZ1575923
SRR1575929 Mayer2015 human NET-seq HeLaS3 DMSO SRZ1575929
SRR1575930 Mayer2015 human NET-seq HeLaS3 DMSO SRZ1575929
SRR1575931 Mayer2015 human NET-seq HeLaS3 DMSO SRZ1575929
SRR1575932 Mayer2015 human NET-seq HeLaS3 FP SRZ1575932
SRR1575933 Mayer2015 human NET-seq HeLaS3 FP SRZ1575932
SRR1575934 Mayer2015 human NET-seq HeLaS3 FP SRZ1575932
SRR1596500 Andersson2014 human GRO-seq HeLa vehicle SRR1596500
SRR1596501 Andersson2014 human GRO-seq HeLa vehicle SRR1596501
SRR1609863 Li2015 human GRO-seq MCF7 Etoh_1hr_siCTL SRR1609863
SRR1609864 Li2015 human GRO-seq MCF7 E2_1hr_siCTL SRR1609864
SRR1609865 Li2015 human GRO-seq MCF7 Etoh_1hr_siNCAPG SRR1609865
SRR1609866 Li2015 human GRO-seq MCF7 E2_1hr_siNCAPG SRR1609866
SRR1609867 Li2015 human GRO-seq MCF7 Etoh_1hr_siCTL SRR1609867
SRR1609868 Li2015 human GRO-seq MCF7 E2_1hr_siCTL SRR1609868
SRR1609869 Li2015 human GRO-seq MCF7 Etoh_1hr_siNCAPD3 SRR1609869
SRR1609870 Li2015 human GRO-seq MCF7 E2_1hr_siNCAPD3 SRR1609870
SRR1611829 Meng2014b mouse GRO-seq naiveB none SRR1611829
SRR1611830 Meng2014b mouse GRO-seq naiveB none SRR1611830
SRR1611831 Meng2014b mouse GRO-seq naiveB none SRR1611831
SRR1611832 Meng2014b mouse GRO-seq GC_B-cell none SRR1611832
SRR1611833 Meng2014b mouse GRO-seq GC_B-cell none SRR1611833
SRR1611834 Meng2014b mouse GRO-seq GC_B-cell none SRR1611834
SRR1611835 Meng2014b mouse GRO-seq naiveB CSR-Act_B_60hr SRR1611835
SRR1611836 Meng2014b mouse GRO-seq naiveB CSR-Act_B_60hr SRR1611836
SRR1611837 Meng2014b mouse GRO-seq naiveB CSR-Act_B_60hr SRR1611837
SRR1611838 Meng2014b mouse GRO-seq MEF none SRR1611838
SRR1611839 Meng2014b mouse GRO-seq MEF none SRR1611839
SRR1611840 Meng2014a human GRO-seq Ramos none SRR1611840
SRR1648886 Puc2015 human GRO-seq LNCaP siControl_1hr_vehicle SRR1648886
SRR1648887 Puc2015 human GRO-seq LNCaP siControl_1hr_dht SRR1648887
SRR1648888 Puc2015 human GRO-seq LNCaP siTOP1_1hr_vehicle SRR1648888
SRR1648889 Puc2015 human GRO-seq LNCaP siTOP1_1hr_dht SRR1648889
SRR1648890 Puc2015 human GRO-seq LNCaP siControl_1hr_vehicle SRR1648890
SRR1648891 Puc2015 human GRO-seq LNCaP siControl_1hr_dht SRR1648891
SRR1648892 Puc2015 human GRO-seq LNCaP siMRE11_1hr_vehicle SRR1648892
SRR1648893 Puc2015 human GRO-seq LNCaP siMRE11_1hr_dht SRR1648893
SRR1648894 Puc2015 human GRO-seq LNCaP siNKX3.1_1hr_vehicle SRR1648894
SRR1648895 Puc2015 human GRO-seq LNCaP siNKX3.1_1hr_dht SRR1648895
SRR1648896 Puc2015 human GRO-seq LNCaP siControl_1hr_vehicle SRZ1648896
SRR1648897 Puc2015 human GRO-seq LNCaP siControl_1hr_vehicle SRZ1648896
SRR1648898 Puc2015 human GRO-seq LNCaP siControl_1hr_dht SRZ1648898
SRR1648899 Puc2015 human GRO-seq LNCaP siControl_1hr_dht SRZ1648898
SRR1648900 Puc2015 human GRO-seq LNCaP siMRE11_1hr_vehicle SRR1648900
SRR1648901 Puc2015 human GRO-seq LNCaP siMRE11_1hr_dht SRR1648901
SRR1648904 Puc2015 human PRO-cap LNCaP vehicle_1hr SRR1648904
SRR1648905 Puc2015 human PRO-cap LNCaP dht_1hr SRR1648905
SRR1648909 Puc2015 human GRO-seq LNCaP siControl_1hr_vehicle SRR1648909
SRR1648910 Puc2015 human GRO-seq LNCaP siControl_1hr_dht SRR1648910
SRR1648911 Puc2015 human GRO-seq LNCaP siTOP1_1hr_vehicle SRR1648911
SRR1648912 Puc2015 human GRO-seq LNCaP siTOP1_1hr_dht SRR1648912
SRR1652068 Wang2015c mouse GRO-seq LSD1n_WT_hs82l1 control SRR1652068
SRR1652069 Wang2015c mouse GRO-seq LSD1n_WT_hs82l1 KCL_1hr SRR1652069
SRR1652070 Wang2015c mouse GRO-seq LSD1n_WT_hs82l1 KCL_3hr SRR1652070
SRR1652071 Wang2015c mouse GRO-seq LSD1n_KO_hs82l1 control SRR1652071
SRR1652072 Wang2015c mouse GRO-seq LSD1n_KO_hs82l1 KCL_1hr SRR1652072
SRR1652073 Wang2015c mouse GRO-seq LSD1n_KO_hs82l1 KCL_3hr SRR1652073
SRR1652074 Wang2015c mouse GRO-seq LSD1n_WT_hs43|4 control SRR1652074
SRR1652075 Wang2015c mouse GRO-seq LSD1n_WT_hs43|4 KCl_1hr SRR1652075
SRR1652076 Wang2015c mouse GRO-seq LSD1n_KO_hs43|4 control SRR1652076
SRR1652077 Wang2015c mouse GRO-seq LSD1n_KO_hs43|3 KCL_1hr SRR1652077
SRR1661564 Fong2014 human GRO-seq HEK293 plasmid_wt_pol_II SRR1661564
SRR1661565 Fong2014 human GRO-seq HEK293 plasmid_wt_pol_II_DRB SRR1661565
SRR1661566 Fong2014 human GRO-seq HEK293 plasmid_wt_pol_II_washout_10min SRR1661566
SRR1661567 Fong2014 human GRO-seq HEK293 plasmid_wt_pol_III_washout_20min SRR1661567
SRR1661568 Fong2014 human GRO-seq HEK293 plasmid_R749H_pol_II SRR1661568
SRR1661569 Fong2014 human GRO-seq HEK293 plasmid_R749H_pol_II_DRB SRR1661569
SRR1661570 Fong2014 human GRO-seq HEK293 plasmid_R749H_pol_II_washout_10min SRR1661570
SRR1661571 Fong2014 human GRO-seq HEK293 plasmid_R749H_pol_II_washout_20min SRR1661571
SRR1661572 Fong2014 human GRO-seq HEK293 plasmid_H1106Y_pol_II SRR1661572
SRR1661573 Fong2014 human GRO-seq HEK293 plasmid_H1106Y_pol_II_DRB SRR1661573
SRR1661574 Fong2014 human GRO-seq HEK293 plasmid_H1106Y_pol_II_washout_10min SRR1661574
SRR1661575 Fong2014 human GRO-seq HEK293 plasmid_H1106Y_pol_II_washout_20min SRR1661575
SRR1661576 Fong2014 human GRO-seq HEK293 plasmid_E1126G_pol_II_DRB SRR1661576
SRR1661577 Fong2014 human GRO-seq HEK293 plasmid_E1126G_pol_II_DRB SRR1661577
SRR1661578 Fong2014 human GRO-seq HEK293 plasmid_E1126G_pol_II_washout_10min SRR1661578
SRR1661579 Fong2014 human GRO-seq HEK293 plasmid_E1126G_pol_II_washout_20min SRR1661579
SRR1693609 Duttke2015 human 5'GRO HeLaS3 na SRZ1693609
SRR1693610 Duttke2015 human 5'GRO HeLaS3 na SRZ1693609
SRR1693611 Duttke2015 human GRO-seq HeLaS3 na SRZ1693611
SRR1693612 Duttke2015 human GRO-seq HeLaS3 na SRZ1693611
SRR1732573 Soccio2015 mouse GRO-seq C57BL/6 LFD_diet_10w SRR1732573
SRR1734841 Zhang2015 mouse GRO-seq AtT20 siCTL_hs1013 SRR1734841
SRR1734842 Zhang2015 mouse GRO-seq AtT20 siMash1_hs1013 SRR1734842
SRR1734843 Zhang2015 mouse GRO-seq AtT20 siLdb1_hs1013 SRR1734843
SRR1734844 Zhang2015 mouse GRO-seq AtT20 siTbx19_hs1013 SRR1734844
SRR1736059 Nojima2015 human NET-seq HeLa DMSO SRR1736059
SRR1736060 Nojima2015 human NET-seq HeLa Pla-B SRR1736060
SRR1736061 Nojima2015 human NET-seq HeLa siCPSF73 SRR1736061
SRR1736062 Nojima2015 human NET-seq HeLa siCPSF73 SRR1736062
SRR1736063 Nojima2015 human NET-seq HeLa siLuc SRR1736063
SRR1736064 Nojima2015 human NET-seq HeLa siLuc SRR1736064
SRR1736065 Nojima2015 human NET-seq HeLa siPTBP1 SRR1736065
SRR1744498 Wang2015b mouse GRO-seq ESC_Tdgfl/fl none SRZ1744498
SRR1744499 Wang2015b mouse GRO-seq ESC_Tdgfl/fl none SRZ1744498
SRR1744500 Wang2015b mouse GRO-seq ESC_Tdgfl/fl DRB_3hr SRZ1744500
SRR1744501 Wang2015b mouse GRO-seq ESC_Tdgfl/fl DRB_3hr SRZ1744500
SRR1744502 Wang2015b mouse GRO-seq ESC_Tdgfl/fl wash_10min SRZ1744502
SRR1744503 Wang2015b mouse GRO-seq ESC_Tdgfl/fl wash_10min SRZ1744502
SRR1744504 Wang2015b mouse GRO-seq ESC_Tdgfl/fl wash_20min SRZ1744504
SRR1744505 Wang2015b mouse GRO-seq ESC_Tdgfl/fl wash_20min SRZ1744504
SRR1744506 Wang2015b mouse GRO-seq ESC_Tdgfl/fl wash_30min SRZ1744506
SRR1744507 Wang2015b mouse GRO-seq ESC_Tdgfl/fl wash_30min SRZ1744506
SRR1744508 Wang2015b mouse GRO-seq ESC_Tdg-KO none SRZ1744508
SRR1744509 Wang2015b mouse GRO-seq ESC_Tdg-KO none SRZ1744508
SRR1744510 Wang2015b mouse GRO-seq ESC_Tdg-KO DRB_3hr SRZ1744510
SRR1744511 Wang2015b mouse GRO-seq ESC_Tdg-KO DRB_3hr SRZ1744510
SRR1744512 Wang2015b mouse GRO-seq ESC_Tdg-KO wash_10min SRZ1744512
SRR1744513 Wang2015b mouse GRO-seq ESC_Tdg-KO wash_10min SRZ1744512
SRR1744514 Wang2015b mouse GRO-seq ESC_Tdg-KO wash_20min SRZ1744514
SRR1744515 Wang2015b mouse GRO-seq ESC_Tdg-KO wash_20min SRZ1744514
SRR1744516 Wang2015b mouse GRO-seq ESC_Tdg-KO wash_30min SRZ1744516
SRR1744517 Wang2015b mouse GRO-seq ESC_Tdg-KO wash_30min SRZ1744516
SRR1745515 Estaras2015 human GRO-seq H1 none SRZ1745515
SRR1745516 Estaras2015 human GRO-seq H1 none SRZ1745515
SRR1745517 Estaras2015 human GRO-seq H1 Wnt3a_6hr SRZ1745517
SRR1745518 Estaras2015 human GRO-seq H1 Wnt3a_6hr SRZ1745517
SRR1745519 Estaras2015 human GRO-seq H1 Wnt3a+Activin_A(WA)_6hr SRZ1745519
SRR1745520 Estaras2015 human GRO-seq H1 Wnt3a+Activin_A(WA)_6hr SRZ1745519
SRR1745521 Estaras2015 human GRO-seq H1 Activin-A_6hr SRZ1745521
SRR1745522 Estaras2015 human GRO-seq H1 Activin-A_6hr SRZ1745521
SRR1745523 Estaras2015 human GRO-seq H1 none SRZ1745523
SRR1745524 Estaras2015 human GRO-seq H1 none SRZ1745523
SRR1745525 Estaras2015 human GRO-seq H1 Wnt3a+Activin-A(WA)_6hr SRZ1745525
SRR1745526 Estaras2015 human GRO-seq H1 Wnt3a+Activin_A(WA)_6hr SRZ1745525
SRR1745527 Estaras2015 human GRO-seq H1 none SRZ1745527
SRR1745528 Estaras2015 human GRO-seq H1 none SRZ1745527
SRR1745529 Estaras2015 human GRO-seq H1 Wnt3a+Activin_A(WA)_6hr SRZ1745529
SRR1745530 Estaras2015 human GRO-seq H1 Wnt3a+Activin_A(WA)_6hr SRZ1745529
SRR1772449 Illingworth2016 mouse GRO-seq HV-S+ control SRR1772449
SRR1772450 Illingworth2016 mouse GRO-seq HV-S+ control SRR1772450
SRR1772451 Illingworth2016 mouse GRO-seq HV+S+ control SRR1772451
SRR1772452 Illingworth2016 mouse GRO-seq HV+S+ control SRR1772452
SRR1810067 Danko2015 human PRO-seq CD4+ na SRZ1810067
SRR1810068 Danko2015 human PRO-seq CD4+ na SRZ1810067
SRR1810069 Danko2015 human PRO-seq CD4+ na SRZ1810067
SRR1810070 Danko2015 human PRO-seq CD4+ na SRZ1810067
SRR1810071 Danko2015 human PRO-seq Jurkat na SRZ1810071
SRR1810072 Danko2015 human PRO-seq Jurkat na SRZ1810071
SRR1823901 Niskanen2015 human GRO-seq K562 control SRR1823901
SRR1823902 Niskanen2015 human GRO-seq K562 control SRR1823902
SRR1823903 Niskanen2015 human GRO-seq K562 heat_30min SRR1823903
SRR1823904 Niskanen2015 human GRO-seq K562 heat_30min SRR1823904
SRR1873284 Telese2015 mouse GRO-seq control SRR1873284
SRR1873285 Telese2015 mouse GRO-seq Reelin_1hr SRR1873285
SRR1916552 Elkon2015 human GRO-seq U2OS+Myc control SRR1916552
SRR1916553 Elkon2015 human GRO-seq U2OS+Myc Myc_activation_5hr SRR1916553
SRR1916554 Elkon2015 human GRO-seq U2OS+Myc control SRR1916554
SRR1916555 Elkon2015 human GRO-seq U2OS+Myc Myc_activation_5hr SRR1916555
SRR1928223 Mayer2015 human NET-seq HEK293T none SRZ1575923
SRR1930084 SRR1930084
SRR1930085 SRR1930085
SRR1930086 SRR1930086
SRR1930087 SRR1930087
SRR1930088 SRR1930088
SRR1930089 SRR1930089
SRR1930090 SRR1930090
SRR1930091 SRR1930091
SRR1950491 Teppo2016 human GRO-seq Nalm6 LUC_24hr SRZ1950491
SRR1950492 Teppo2016 human GRO-seq Nalm6 LUC_24hr SRZ1950491
SRR1950493 Teppo2016 human GRO-seq Nalm6 LUC_24hr SRZ1950493
SRR1950494 Teppo2016 human GRO-seq Nalm6 LUC_24hr SRZ1950493
SRR1950495 Teppo2016 human GRO-seq Nalm6 TEL-AML1_0hr SRZ1950495
SRR1950496 Teppo2016 human GRO-seq Nalm6 TEL-AML1_0hr SRZ1950495
SRR1950497 Teppo2016 human GRO-seq Nalm6 TEL-AML1_0hr SRZ1950497
SRR1950498 Teppo2016 human GRO-seq Nalm6 TEL-AML1_0hr SRZ1950497
SRR1950499 Teppo2016 human GRO-seq Nalm6 TEL-AML1_4hr SRZ1950499
SRR1950500 Teppo2016 human GRO-seq Nalm6 TEL-AML1_4hr SRZ1950499
SRR1950501 Teppo2016 human GRO-seq Nalm6 TEL-AML1_4hr SRZ1950501
SRR1950502 Teppo2016 human GRO-seq Nalm6 TEL-AML1_4hr SRZ1950501
SRR1950503 Teppo2016 human GRO-seq Nalm6 TEL-AML1_12hr SRZ1950503
SRR1950504 Teppo2016 human GRO-seq Nalm6 TEL-AML1_12hr SRZ1950503
SRR1950505 Teppo2016 human GRO-seq Nalm6 TEL-AML1_12hr SRZ1950505
SRR1950506 Teppo2016 human GRO-seq Nalm6 TEL-AML1_12hr SRZ1950505
SRR1950507 Teppo2016 human GRO-seq Nalm6 TEL-AML1_24hr SRZ1950507
SRR1950508 Teppo2016 human GRO-seq Nalm6 TEL-AML1_24hr SRZ1950507
SRR1950509 Teppo2016 human GRO-seq Nalm6 TEL-AML1_24hr SRZ1950509
SRR1950510 Teppo2016 human GRO-seq Nalm6 TEL-AML1_24hr SRZ1950509
SRR1950511 Teppo2016 human GRO-seq Nalm6 TEL-AML1mut_24hr SRZ1950511
SRR1950512 Teppo2016 human GRO-seq Nalm6 TEL-AML1mut_24hr SRZ1950511
SRR1950513 Teppo2016 human GRO-seq Nalm6 TEL-AML1mut_24hr SRZ1950513
SRR1950514 Teppo2016 human GRO-seq Nalm6 TEL-AML1mut_24hr SRZ1950513
SRR1951426 Heinaniemi2016 human GRO-seq Nalm6 control SRR1951426
SRR1951427 Heinaniemi2016 human GRO-seq Nalm6 stromalCells_24hr SRR1951427
SRR1951428 Heinaniemi2016 human GRO-seq REH control SRZ1951428
SRR1951429 Heinaniemi2016 human GRO-seq REH control SRZ1951428
SRR1951430 Heinaniemi2016 human GRO-seq REH control SRZ1951430
SRR1951431 Heinaniemi2016 human GRO-seq REH control SRZ1951430
SRR1951432 Heinaniemi2016 human GRO-seq REH control SRR1951432
SRR1951434 Heinaniemi2016 human GRO-seq REH stromalCells_24hr SRR1951434
SRR1951435 Heinaniemi2016 human GRO-seq REH stromalCells_48hr SRR1951435
SRR1951436 Heinaniemi2016 human GRO-seq REH difA-stromalCells_24hr SRR1951436
SRR1951437 Heinaniemi2016 human GRO-seq REH difO-stromalCells_24hr SRR1951437
SRR1991266 Sigova2015 mouse GRO-seq v6.5 na SRR1991266
SRR1991267 Sigova2015 mouse GRO-seq BirA DMSO SRR1991267
SRR1991268 Sigova2015 mouse GRO-seq BirA ActD SRR1991268
SRR2036963 Flynn2016 mouse GRO-seq v6.5 7SK_ASO_12hr SRR2036963
SRR2036964 Flynn2016 mouse GRO-seq v6.5 7SK_ASO_12hr SRR2036964
SRR2036965 Flynn2016 mouse GRO-seq v6.5 control SRR2036965
SRR2036966 Flynn2016 mouse GRO-seq v6.5 control SRR2036966
SRR2059423 SRR2059423
SRR2059424 SRR2059424
SRR2084576 Chen2015 human GRO-seq HCT116 shPAF1 SRZ2084576
SRR2084577 Chen2015 human GRO-seq HCT116 shPAF1 SRZ2084576
SRR2084578 Chen2015 human GRO-seq HCT116 shPAF1 SRZ2084576
SRR2084579 Chen2015 human GRO-seq HCT116 shPAF1 SRZ2084576
SRR2084580 Chen2015 human GRO-seq HCT116 shPAF1 SRZ2084580
SRR2084581 Chen2015 human GRO-seq HCT116 shPAF1 SRZ2084580
SRR2084582 Chen2015 human GRO-seq HCT116 shPAF1 SRZ2084580
SRR2084583 Chen2015 human GRO-seq HCT116 shPAF1 SRZ2084580
SRR2084584 Chen2015 human GRO-seq HCT116 control SRZ2084584
SRR2084585 Chen2015 human GRO-seq HCT116 control SRZ2084584
SRR2084586 Chen2015 human GRO-seq HCT116 control SRZ2084584
SRR2084587 Chen2015 human GRO-seq HCT116 control SRZ2084584
SRR2084588 Chen2015 human GRO-seq HCT116 control SRZ2084588
SRR2084589 Chen2015 human GRO-seq HCT116 control SRZ2084588
SRR2084590 Chen2015 human GRO-seq HCT116 control SRZ2084588
SRR2084591 Chen2015 human GRO-seq HCT116 control SRZ2084588
SRR2153508 Salony2016 human GRO-seq MCF7_AKT1low DMSO_Akti_72hr SRR2153508
SRR2153509 Salony2016 human GRO-seq MCF7_AKT1low DMSO_Akti_72hr SRR2153509
SRR2153510 Salony2016 human GRO-seq MCF7_AKT1wt DMSO_Akti_72hr SRR2153510
SRR2153511 Salony2016 human GRO-seq MCF7_AKT1wt DMSO_Akti_72hr SRR2153511
SRR2153512 Salony2016 human GRO-seq HCT116_AKT1low DMSO_Akti_72hr SRR2153512
SRR2153513 Salony2016 human GRO-seq HCT116_AKT1low DMSO_Akti_72hr SRR2153513
SRR2153514 Salony2016 human GRO-seq HCT116_AKT1wt DMSO_Akti_72hr SRR2153514
SRR2153515 Salony2016 human GRO-seq HCT116_AKT1wt DMSO_Akti_72hr SRR2153515
SRR2226207 Flynn2016 mouse GRO-seq v6.5 7SK_ASO_12hr SRR2226207
SRR2226208 Flynn2016 mouse GRO-seq v6.5 7SK_ASO_12hr SRR2226208
SRR2226209 Flynn2016 mouse GRO-seq v6.5 control SRR2226209
SRR2226210 Flynn2016 mouse GRO-seq v6.5 control SRR2226210
SRR2518187 Strikoudis2016 mouse GRO-seq C57BL/6X129/Sv LIF SRR2518187
SRR2518188 Strikoudis2016 mouse GRO-seq C57BL/6X129/Sv LIF SRR2518188
SRR2518189 Strikoudis2016 mouse GRO-seq C57BL/6X129/Sv LIF SRR2518189
SRR2518190 Strikoudis2016 mouse GRO-seq C57BL/6X129/Sv none SRR2518190
SRR2518191 Strikoudis2016 mouse GRO-seq C57BL/6X129/Sv none SRR2518191
SRR2518192 Strikoudis2016 mouse GRO-seq C57BL/6X129/Sv none SRR2518192
SRR2518193 Strikoudis2016 mouse GRO-seq C57BL/6X129/Sv flavopiridol_1hr SRR2518193
SRR2518194 Strikoudis2016 mouse GRO-seq C57BL/6X129/Sv flavopiridol_1hr SRR2518194
SRR2518195 Strikoudis2016 mouse GRO-seq C57BL/6X129/Sv flavopiridol_1hr SRR2518195
SRR2518196 Strikoudis2016 mouse GRO-seq C57BL/6X129/Sv shControlKD_3d+LIF SRR2518196
SRR2518197 Strikoudis2016 mouse GRO-seq C57BL/6X129/Sv shControlKD_3d+LIF SRR2518197
SRR2518198 Strikoudis2016 mouse GRO-seq C57BL/6X129/Sv shControlKD_3d+LIF SRR2518198
SRR2518199 Strikoudis2016 mouse GRO-seq C57BL/6X129/Sv shPhf5aKD_3d+LIF SRR2518199
SRR2518200 Strikoudis2016 mouse GRO-seq C57BL/6X129/Sv shPhf5aKD_3d+LIF SRR2518200
SRR2518201 Strikoudis2016 mouse GRO-seq C57BL/6X129/Sv shPhf5aKD_3d+LIF SRR2518201
SRR2518202 Strikoudis2016 mouse GRO-seq C57BL/6X129/Sv shPaf1KD_3d+LIF SRR2518202
SRR2518203 Strikoudis2016 mouse GRO-seq C57BL/6X129/Sv shPaf1KD_3d+LIF SRR2518203
SRR2518204 Strikoudis2016 mouse GRO-seq C57BL/6X129/Sv shPaf1KD_3d+LIF SRR2518204
SRR2724029 Gibson2016 human GRO-seq MCF7_LuciferaseKD vehicle SRR2724029
SRR2724030 Gibson2016 human GRO-seq MCF7_LuciferaseKD vehicle SRR2724030
SRR2724031 Gibson2016 human GRO-seq MCF7_PARP1KD vehicle SRR2724031
SRR2724032 Gibson2016 human GRO-seq MCF7_PARP1KD vehicle SRR2724032
SRR2820481 Wei2016 mouse GRO-seq NSPC_ATM-KO TA SRZ2820481
SRR2820482 Wei2016 mouse GRO-seq NSPC_ATM-KO TA SRZ2820481
SRR2820483 Wei2016 mouse GRO-seq NSPC_ATM-KO TA SRZ2820483
SRR2820484 Wei2016 mouse GRO-seq NSPC_ATM-KO TA SRZ2820483
SRR2820485 Wei2016 mouse GRO-seq NSPC_ATM-KO TA SRZ2820485
SRR2820486 Wei2016 mouse GRO-seq NSPC_ATM-KO TA SRZ2820485
SRR2820487 Wei2016 mouse GRO-seq NSPC_Xrcc4-KO_p53-KO none SRZ2820487
SRR2820488 Wei2016 mouse GRO-seq NSPC_Xrcc4-KO_p53-KO none SRZ2820487
SRR2820489 Wei2016 mouse GRO-seq NSPC_Xrcc4-KO_p53-KO none SRZ2820489
SRR2820490 Wei2016 mouse GRO-seq NSPC_Xrcc4-KO_p53-KO none SRZ2820489
SRR2820491 Wei2016 mouse GRO-seq NSPC_Xrcc4-KO_p53-KO none SRZ2820491
SRR2820492 Wei2016 mouse GRO-seq NSPC_Xrcc4-KO_p53-KO none SRZ2820491
SRR2960994 Magnuson2015 human Bru-seq K562 control_NA_.5hr_0hr_NA SRZ2960994
SRR2960995 Magnuson2015 human Bru-seq K562 control_NA_.5hr_0hr_NA SRZ2960994
SRR2960996 Magnuson2015 human Bru-seq K562 control_NA_.5hr_6hr_.5hr SRZ2960996
SRR2960997 Magnuson2015 human Bru-seq K562 control_NA_.5hr_6hr_.5hr SRZ2960996
SRR2960998 Magnuson2015 human Bru-seq K562 uv25J/m^2_0hr_.5hr_0hr_.5hr SRZ2960998
SRR2960999 Magnuson2015 human Bru-seq K562 uv25J/m^2_0hr_.5hr_0hr_.5hr SRZ2960998
SRR2961000 Magnuson2015 human Bru-seq K562 uv100J/m^2_0hr_.5hr_0hr_.5hr SRZ2961000
SRR2961001 Magnuson2015 human Bru-seq K562 uv100J/m^2_0hr_.5hr_0hr_.5hr SRZ2961000
SRR2961002 Magnuson2015 human Bru-seq HF1 control_NA_.5hr_0hr_NA SRZ2961002
SRR2961003 Magnuson2015 human Bru-seq HF1 control_NA_.5hr_0hr_NA SRZ2961002
SRR2961004 Magnuson2015 human Bru-seq HF1 uv20J/m^2_0hr_.5hr_0hr_NA SRZ2961004
SRR2961005 Magnuson2015 human Bru-seq HF1 uv20J/m^2_0hr_.5hr_0hr_NA SRZ2961004
SRR2961006 Magnuson2015 human Bru-seq HF1 uv20J/m^2_0hr_.5hr_0hr_.5hr SRZ2961006
SRR2961007 Magnuson2015 human Bru-seq HF1 uv20J/m^2_0hr_.5hr_0hr_.5hr SRZ2961006
SRR2961008 Magnuson2015 human Bru-seq HF1 uv20J/m^2_0hr_.5hr_0hr_NA SRZ2961008
SRR2961009 Magnuson2015 human Bru-seq HF1 uv20J/m^2_0hr_.5hr_0hr_NA SRZ2961008
SRR2961010 Magnuson2015 human Bru-seq HF1 uv20J/m^2_0hr_.5hr_0hr_NA SRZ2961008
SRR2961011 Magnuson2015 human Bru-seq HF1 uv20J/m^2_0hr_.5hr_0hr_NA SRZ2961008
SRR2961012 Magnuson2015 human Bru-seq HF1 uv20J/m^2_0hr_.5hr_0hr_NA SRZ2961012
SRR2961013 Magnuson2015 human Bru-seq HF1 uv20J/m^2_0hr_.5hr_0hr_NA SRZ2961012
SRR2961014 Magnuson2015 human Bru-seq HF1 uv20J/m^2_0hr_.5hr_0hr_NA SRZ2961012
SRR2961015 Magnuson2015 human Bru-seq HF1 uv20J/m^2_0hr_.5hr_0hr_NA SRZ2961012
SRR3051599 SRR3051599
SRR3051600 SRR3051600
SRR3051601 SRR3051601
SRR3051602 SRR3051602
SRR3051603 SRR3051603
SRR3051604 SRR3051604
SRR3051605 SRR3051605
SRR3051606 SRR3051606
SRR3160418 SRR3160418
SRR3160419 SRR3160419
SRR3160420 SRR3160420
SRR3160421 SRR3160421
SRR3160422 SRR3160422
SRR3160423 SRR3160423
SRR3194602 Oittinen2016 mouse GRO-seq ISC none SRR3194602
SRR3194603 Oittinen2016 mouse GRO-seq enterocyte none SRR3194603
SRR3194604 Oittinen2016 mouse GRO-seq ISC none SRR3194604
SRR3194605 Oittinen2016 mouse GRO-seq enterocyte none SRR3194605
SRR3223688 SRZ3223688
SRR3223689 SRZ3223688
SRR3223690 SRZ3223690
SRR3223691 SRZ3223690
SRR3223692 SRZ3223692
SRR3223693 SRZ3223692
SRR3223694 SRZ3223694
SRR3223695 SRZ3223694
SRR3223696 SRZ3223696
SRR3223697 SRZ3223696
SRR3223698 SRZ3223698
SRR3223699 SRZ3223698
SRR3309664 Sun2016 mouse GRO-seq C57BL/6 none SRR3309664
SRR3309665 Sun2016 mouse GRO-seq C57BL/6_HDAC3KO none SRR3309665
SRR3313817 SRR3313817
SRR3313818 SRR3313818
SRR3313819 SRR3313819
SRR3313820 SRR3313820
SRR3500459 Gibson2016 human GRO-seq MCF7_LuciferaseKD PJ34_1hr SRR3500459
SRR3535362 SRR3535362
SRR3535363 SRR3535363
SRR3535364 SRR3535364
SRR3535365 SRR3535365
SRR3728886 Malinen2016 human GRO-seq LNCaP DHT+TNFa_2hr SRR3728886
SRR3728887 Malinen2016 human GRO-seq LNCaP DHT+TNFa_2hr SRR3728887
SRR3728888 Malinen2016 human GRO-seq LNCaP DHT_2hr SRR3728888
SRR3728889 Malinen2016 human GRO-seq LNCaP DHT_2hr SRR3728889
SRR3728890 Malinen2016 human GRO-seq LNCaP DMSO_2hr SRR3728890
SRR3728891 Malinen2016 human GRO-seq LNCaP DMSO_2hr SRR3728891
SRR3728892 Malinen2016 human GRO-seq LNCaP TNFa_2hr SRR3728892
SRR3728893 Malinen2016 human GRO-seq LNCaP TNFa_2hr SRR3728893
SRR3923617 Toropainen2016 human GRO-seq VCaP Etoh_2hr SRR3923617
SRR3923618 Toropainen2016 human GRO-seq VCaP Etoh_2hr SRR3923618
SRR3923619 Toropainen2016 human GRO-seq VCaP R1881_30min SRR3923619
SRR3923620 Toropainen2016 human GRO-seq VCaP R1881_30min SRR3923620
SRR3923621 Toropainen2016 human GRO-seq VCaP R1881_2hr SRR3923621
SRR3923622 Toropainen2016 human GRO-seq VCaP R1881_2hr SRR3923622
SRR4001595 Toropainen2016 human GRO-seq VCaP Etoh_4hr SRR4001595
SRR4001596 Toropainen2016 human GRO-seq VCaP Etoh_4hr SRR4001596
SRR4001597 Toropainen2016 human GRO-seq VCaP DHT_4hr SRR4001597
SRR4001598 Toropainen2016 human GRO-seq VCaP DHT_4hr SRR4001598
SRR408117 Marazzi2012 human GRO-seq A549 none SRR408117
SRR408118 Marazzi2012 human GRO-seq A549 Flag-NS1_12hr SRR408118
SRR408119 Marazzi2012 human GRO-seq A549 delta-PAF_12hr SRR408119
SRR4782130 Heinaniemi2016 human GRO-seq REH stromalCells_24hr SRZ1951433
SRR4842300 Wang2016 mouse GRO-seq C57BL/6 Nocodazole SRR4842300
SRR4842301 Wang2016 mouse GRO-seq C57BL/6 Nocodazole SRR4842301
SRR4842302 Wang2016 mouse GRO-seq C57BL/6 Nocodazole+synchronized_G1 SRR4842302
SRR4842303 Wang2016 mouse GRO-seq C57BL/6 Nocodazole+synchronized_G1 SRR4842303
SRR497904 Hah2013 human GRO-seq MCF7 vehicle SRM497904
SRR497904 Hah2013 human GRO-seq MCF7 vehicle SRZ497904
SRR497905 Hah2013 human GRO-seq MCF7 vehicle SRM497904
SRR497905 Hah2013 human GRO-seq MCF7 vehicle SRZ497904
SRR497906 Hah2013 human GRO-seq MCF7 vehicle SRM497904
SRR497906 Hah2013 human GRO-seq MCF7 vehicle SRZ497904
SRR497907 Hah2013 human GRO-seq MCF7 vehicle SRM497907
SRR497907 Hah2013 human GRO-seq MCF7 vehicle SRZ497907
SRR497908 Hah2013 human GRO-seq MCF7 vehicle SRM497907
SRR497908 Hah2013 human GRO-seq MCF7 vehicle SRZ497907
SRR497909 Hah2013 human GRO-seq MCF7 vehicle SRM497907
SRR497909 Hah2013 human GRO-seq MCF7 vehicle SRZ497907
SRR497910 Hah2013 human GRO-seq MCF7 vehicle SRM497907
SRR497910 Hah2013 human GRO-seq MCF7 vehicle SRZ497907
SRR497911 Hah2013 human GRO-seq MCF7 E2_10min SRM497911
SRR497911 Hah2013 human GRO-seq MCF7 E2_10min SRR497911
SRR497912 Hah2013 human GRO-seq MCF7 E2_10min SRM497912
SRR497912 Hah2013 human GRO-seq MCF7 E2_10min SRZ497912
SRR497913 Hah2013 human GRO-seq MCF7 E2_10min SRM497912
SRR497913 Hah2013 human GRO-seq MCF7 E2_10min SRZ497912
SRR497914 Hah2013 human GRO-seq MCF7 E2_40min SRM497914
SRR497914 Hah2013 human GRO-seq MCF7 E2_40min SRZ497914
SRR497915 Hah2013 human GRO-seq MCF7 E2_40min SRZ497914
SRR497915 Hah2013 human GRO-seq MCF7 E2_40min SRM497914
SRR497916 Hah2013 human GRO-seq MCF7 E2_40min SRM497914
SRR497916 Hah2013 human GRO-seq MCF7 E2_40min SRZ497914
SRR497917 Hah2013 human GRO-seq MCF7 E2_40min SRM497917
SRR497917 Hah2013 human GRO-seq MCF7 E2_40min SRZ497917
SRR497918 Hah2013 human GRO-seq MCF7 E2_40min SRM497917
SRR497918 Hah2013 human GRO-seq MCF7 E2_40min SRZ497917
SRR497919 Hah2013 human GRO-seq MCF7 E2_40min SRM497917
SRR497919 Hah2013 human GRO-seq MCF7 E2_40min SRZ497917
SRR497920 Hah2013 human GRO-seq MCF7 E2_40min SRM497917
SRR497920 Hah2013 human GRO-seq MCF7 E2_40min SRZ497917
SRR497921 Hah2013 human GRO-seq MCF7 E2_160min SRR497921
SRR497922 Hah2013 human GRO-seq MCF7 E2_160min SRZ497922
SRR497923 Hah2013 human GRO-seq MCF7 E2_160min SRZ497922
SRR5034773 SRR5034773
SRR5034774 SRR5034774
SRR5084317 SRR5084317
SRR5084318 SRR5084318
SRR5084319 SRR5084319
SRR5084320 SRR5084320
SRR5084321 SRR5084321
SRR5084322 SRR5084322
SRR5084323 SRR5084323
SRR5084324 SRR5084324
SRR5085734 SRR5085734
SRR5085735 SRR5085735
SRR5085736 SRR5085736
SRR5085737 SRR5085737
SRR5085738 SRR5085738
SRR5085739 SRR5085739
SRR5085894 SRR5085894
SRR5085895 SRR5085895
SRR5085896 SRR5085896
SRR5085897 SRR5085897
SRR5085898 SRR5085898
SRR5085899 SRR5085899
SRR5085900 SRR5085900
SRR5144955 SRR5144955
SRR5144956 SRR5144956
SRR5144957 SRR5144957
SRR5144958 SRR5144958
SRR5227979 SRR5227979
SRR5227980 SRR5227980
SRR5227981 SRR5227981
SRR5227982 SRR5227982
SRR5227983 SRR5227983
SRR5227985 SRR5227985
SRR531824 Wang2014 human GRO-seq B-cell none SRR531824
SRR531825 Wang2014 human GRO-seq B-cell none SRR531825
SRR531826 Wang2014 human PRO-seq B-cell none SRR531826
SRR543417 Lin2012 mouse GRO-seq Tcf3(E2A)deficient_pre-pro-B none SRZ543417
SRR543418 Lin2012 mouse GRO-seq Tcf3(E2A)deficient_pre-pro-B none SRZ543417
SRR543419 Lin2012 mouse GRO-seq Rag1_deficient_pro-B none SRZ543419
SRR543420 Lin2012 mouse GRO-seq Rag1_deficient_pro-B none SRZ543419
SRR5466770 SRR5466770
SRR574824 Sigova2013 human GRO-seq H1 none SRR574824
SRR574825 Sigova2013 human GRO-seq H1 none SRR574825
SRR574826 Sigova2013 human GRO-seq H1 none SRR574826
SRR574827 Sigova2013 human GRO-seq H1 Activin_0hr SRR574827
SRR574828 Sigova2013 human GRO-seq H1 Activin_0hr SRR574828
SRR574829 Sigova2013 human GRO-seq H1 Activin_1hr SRR574829
SRR574830 Sigova2013 human GRO-seq H1 Activin_1hr SRR574830
SRR574831 Sigova2013 human GRO-seq H1 Activin_48hr SRR574831
SRR579293 Danko2013 human GRO-seq AC16 vehicle SRR579293
SRR579294 Danko2013 human GRO-seq AC16 vehicle SRR579294
SRR579295 Danko2013 human GRO-seq AC16 TNFa_10min SRR579295
SRR579296 Danko2013 human GRO-seq AC16 TNFa_10min SRR579296
SRR579297 Danko2013 human GRO-seq AC16 TNFa_30min SRR579297
SRR579298 Danko2013 human GRO-seq AC16 TNFa_30min SRR579298
SRR579299 Danko2013 human GRO-seq MCF7 vehicle SRZ579299
SRR579300 Danko2013 human GRO-seq MCF7 vehicle SRZ579299
SRR579301 Danko2013 human GRO-seq MCF7 vehicle SRZ579299
SRR579302 Danko2013 human GRO-seq MCF7 vehicle SRZ579299
SRR579303 Danko2013 human GRO-seq MCF7 vehicle SRZ579299
SRR579304 Danko2013 human GRO-seq MCF7 vehicle SRZ579299
SRR579305 Danko2013 human GRO-seq MCF7 vehicle SRZ579299
SRR579306 Danko2013 human GRO-seq MCF7 vehicle SRZ579299
SRR579307 Danko2013 human GRO-seq MCF7 vehicle SRZ579299
SRR579308 Danko2013 human GRO-seq MCF7 vehicle SRZ579299
SRR579309 Danko2013 human GRO-seq MCF7 vehicle SRZ579299
SRR579310 Danko2013 human GRO-seq MCF7 vehicle SRZ579310
SRR579311 Danko2013 human GRO-seq MCF7 vehicle SRZ579310
SRR579312 Danko2013 human GRO-seq MCF7 vehicle SRZ579310
SRR579313 Danko2013 human GRO-seq MCF7 vehicle SRZ579310
SRR579314 Danko2013 human GRO-seq MCF7 vehicle SRZ579310
SRR579315 Danko2013 human GRO-seq MCF7 vehicle SRZ579310
SRR579316 Danko2013 human GRO-seq MCF7 vehicle SRZ579310
SRR579317 Danko2013 human GRO-seq MCF7 vehicle SRZ579310
SRR579318 Danko2013 human GRO-seq MCF7 vehicle SRZ579310
SRR579319 Danko2013 human GRO-seq MCF7 vehicle SRZ579319
SRR579320 Danko2013 human GRO-seq MCF7 vehicle SRZ579319
SRR579321 Danko2013 human GRO-seq MCF7 vehicle SRZ579319
SRR579322 Danko2013 human GRO-seq MCF7 vehicle SRZ579319
SRR579323 Danko2013 human GRO-seq MCF7 vehicle SRZ579319
SRR579324 Danko2013 human GRO-seq MCF7 E2_10min SRZ579324
SRR579325 Danko2013 human GRO-seq MCF7 E2_10min SRZ579324
SRR579326 Danko2013 human GRO-seq MCF7 E2_10min SRZ579324
SRR579327 Danko2013 human GRO-seq MCF7 E2_10min SRZ579324
SRR579328 Danko2013 human GRO-seq MCF7 E2_10min SRZ579324
SRR579329 Danko2013 human GRO-seq MCF7 E2_10min SRZ579324
SRR579330 Danko2013 human GRO-seq MCF7 E2_10min SRZ579324
SRR579331 Danko2013 human GRO-seq MCF7 E2_10min SRZ579324
SRR579332 Danko2013 human GRO-seq MCF7 E2_10min SRZ579324
SRR579333 Danko2013 human GRO-seq MCF7 E2_10min SRZ579324
SRR579334 Danko2013 human GRO-seq MCF7 E2_10min SRZ579324
SRR579335 Danko2013 human GRO-seq MCF7 E2_10min SRZ579335
SRR579336 Danko2013 human GRO-seq MCF7 E2_10min SRZ579335
SRR579337 Danko2013 human GRO-seq MCF7 E2_10min SRZ579335
SRR579338 Danko2013 human GRO-seq MCF7 E2_10min SRZ579335
SRR579339 Danko2013 human GRO-seq MCF7 E2_10min SRZ579335
SRR579340 Danko2013 human GRO-seq MCF7 E2_10min SRZ579335
SRR579341 Danko2013 human GRO-seq MCF7 E2_10min SRZ579335
SRR579342 Danko2013 human GRO-seq MCF7 E2_10min SRZ579342
SRR579343 Danko2013 human GRO-seq MCF7 E2_10min SRZ579342
SRR579344 Danko2013 human GRO-seq MCF7 E2_10min SRZ579342
SRR579345 Danko2013 human GRO-seq MCF7 E2_10min SRZ579342
SRR579346 Danko2013 human GRO-seq MCF7 E2_10min SRZ579342
SRR579347 Danko2013 human GRO-seq MCF7 E2_25min SRZ579347
SRR579348 Danko2013 human GRO-seq MCF7 E2_25min SRZ579347
SRR579349 Danko2013 human GRO-seq MCF7 E2_25min SRZ579347
SRR579350 Danko2013 human GRO-seq MCF7 E2_25min SRZ579347
SRR579351 Danko2013 human GRO-seq MCF7 E2_25min SRZ579347
SRR579352 Danko2013 human GRO-seq MCF7 E2_25min SRZ579347
SRR579353 Danko2013 human GRO-seq MCF7 E2_25min SRZ579353
SRR579354 Danko2013 human GRO-seq MCF7 E2_25min SRZ579353
SRR579355 Danko2013 human GRO-seq MCF7 E2_25min SRZ579353
SRR579356 Danko2013 human GRO-seq MCF7 E2_25min SRZ579353
SRR579357 Danko2013 human GRO-seq MCF7 E2_25min SRZ579353
SRR579358 Danko2013 human GRO-seq MCF7 E2_25min SRZ579353
SRR579359 Danko2013 human GRO-seq MCF7 E2_25min SRZ579353
SRR579360 Danko2013 human GRO-seq MCF7 E2_40min SRZ579360
SRR579361 Danko2013 human GRO-seq MCF7 E2_40min SRZ579360
SRR579362 Danko2013 human GRO-seq MCF7 E2_40min SRZ579360
SRR579363 Danko2013 human GRO-seq MCF7 E2_40min SRZ579360
SRR579364 Danko2013 human GRO-seq MCF7 E2_40min SRZ579364
SRR579365 Danko2013 human GRO-seq MCF7 E2_40min SRZ579364
SRR579366 Danko2013 human GRO-seq MCF7 E2_40min SRZ579364
SRR579367 Danko2013 human GRO-seq MCF7 E2_40min SRZ579364
SRR579368 Danko2013 human GRO-seq MCF7 E2_40min SRZ579364
SRR579369 Danko2013 human GRO-seq MCF7 E2_40min SRZ579364
SRR579370 Danko2013 human GRO-seq MCF7 E2_40min SRZ579370
SRR579371 Danko2013 human GRO-seq MCF7 E2_40min SRZ579370
SRR579372 Danko2013 human GRO-seq MCF7 E2_40min SRZ579370
SRR579373 Danko2013 human GRO-seq MCF7 E2_40min SRZ579370
SRR579374 Danko2013 human GRO-seq MCF7 E2_40min SRZ579370
SRR579375 Danko2013 human GRO-seq MCF7 E2_40min SRZ579370
SRR579376 Danko2013 human GRO-seq MCF7 E2_40min SRZ579370
SRR579377 Danko2013 human GRO-seq MCF7 E2_40min SRZ579370
SRR579378 Danko2013 human GRO-seq MCF7 E2_40min SRZ579370
SRR620530 Hu2012 human GRO-seq Ntera2_hESCs vehicle SRR620530
SRR620531 Hu2012 human GRO-seq Ntera2_hESCs RA_2day SRR620531
SRR639050 Jin2013 human GRO-seq IMR90 vehicle SRR639050
SRR639051 Jin2013 human GRO-seq IMR90 TNFa_60min SRR639051
SRR653421 Hah2013 human GRO-seq MCF7 vehicle SRM497904
SRR653422 Hah2013 human GRO-seq MCF7 vehicle SRM497907
SRR653423 Hah2013 human GRO-seq MCF7 E2_10min SRM497911
SRR653424 Hah2013 human GRO-seq MCF7 E2_10min SRM497912
SRR653425 Hah2013 human GRO-seq MCF7 E2_40min SRM497914
SRR653426 Hah2013 human GRO-seq MCF7 E2_40min SRM497917
SRR797530 Ji2013 mouse GRO-seq MEF_SRSF1-wt Dox_4day SRR797530
SRR797531 Ji2013 mouse GRO-seq MEF_SRSF1-KO Dox_4day SRR797531
SRR797532 Ji2013 mouse GRO-seq MEF_SRSF2-wt Dox_2day SRR797532
SRR797533 Ji2013 mouse GRO-seq MEF_SRSF2-KO Dox_2day SRR797533
SRR797534 Ji2013 mouse GRO-seq MEF control SRR797534
SRR797535 Ji2013 mouse GRO-seq MEF DRB_3hr SRR797535
SRR816998 Li2013 human GRO-seq MCF7 E2_1hr SRR816998
SRR816999 Li2013 human GRO-seq MCF7 E2_1hr SRR816999
SRR817000 Li2013 human GRO-seq MCF7 Etoh_1hr SRR817000
SRR817001 Li2013 human GRO-seq MCF7 Etoh_1hr SRR817001
SRR817002 Li2013 human GRO-seq MCF7 siSMC3_E2_1hr SRR817002
SRR817003 Li2013 human GRO-seq MCF7 siSMC3_EtOH SRR817003
SRR826209 Lam2013 mouse GRO-seq BMDM control SRZ826209
SRR826210 Lam2013 mouse GRO-seq BMDM control SRZ826209
SRR826211 Lam2013 mouse GRO-seq BMDM control SRZ826209
SRR826212 Lam2013 mouse GRO-seq BMDM control SRZ826209
SRR826213 Lam2013 mouse GRO-seq BMDM control SRZ826209
SRR826214 Lam2013 mouse GRO-seq BMDM control SRZ826209
SRR826215 Lam2013 mouse GRO-seq BMDM control SRZ826209
SRR826216 Lam2013 mouse GRO-seq BMDM control SRZ826209
SRR826217 Lam2013 mouse GRO-seq BMDM control SRZ826217
SRR826218 Lam2013 mouse GRO-seq BMDM RevErb_DKO SRZ826217
SRR826219 Lam2013 mouse GRO-seq BMDM RevErb_DKO SRZ826217
SRR826220 Lam2013 mouse GRO-seq BMDM RevErb_DKO SRZ826217
SRR826221 Lam2013 mouse GRO-seq BMDM RevErb_DKO SRZ826217
SRR826222 Lam2013 mouse GRO-seq BMDM RevErb_DKO SRZ826217
SRR826223 Lam2013 mouse GRO-seq BMDM RevErb_DKO SRZ826217
SRR826224 Lam2013 mouse GRO-seq BMDM RevErb_DKO SRZ826217
SRR826225 Lam2013 mouse 5'GRO rawmacro control SRZ826225
SRR826226 Lam2013 mouse 5'GRO rawmacro control SRZ826225
SRR826227 Lam2013 mouse 5'GRO rawmacro RevErb_DKO SRR826227
SRR828695 Galbraith2013 human GRO-seq HCT116 DMSO_1hr SRR828695
SRR828696 Galbraith2013 human GRO-seq HCT116 DMSO_1hr SRR828696
SRR828729 Galbraith2013 human GRO-seq HCT116 DMSO_1hr SRR828729
SRR836116 Heinz2013 mouse GRO-seq peritoneal_thioglycolate-elicityed_macrophage none SRR836116
SRR836117 Heinz2013 mouse GRO-seq peritoneal_thioglycolate-elicityed_macrophage KLA_1hr SRR836117
SRR836118 Heinz2013 mouse GRO-seq peritoneal_thioglycolate-elicityed_macrophage none SRR836118
SRR836119 Heinz2013 mouse GRO-seq peritoneal_thioglycolate-elicityed_macrophage KLA_1hr SRR836119
SRR868693 Lam2013 mouse GRO-seq BMDM RevErb_DKO SRZ826217
SRR892016 Yang2013 human GRO-seq LNCaP siCTL_minusDHT_hs2612 SRR892016
SRR892017 Yang2013 human GRO-seq LNCaP siCTL_DHT_hs2612 SRR892017
SRR892018 Yang2013 human GRO-seq LNCaP siPYGO2_minusDHT_hs2612 SRR892018
SRR892019 Yang2013 human GRO-seq LNCaP siPYGO2_plusDHT_hs2612 SRR892019
SRR892025 Yang2013 human GRO-seq LNCaP minusDHT_ASO_CTL_hs1517 SRR892025
SRR892026 Yang2013 human GRO-seq LNCaP minusDHT_PCGEM1_hs1514 SRR892026
SRR892027 Yang2013 human GRO-seq LNCaP minusDHT_ASO_PRNCR1_hs1517 SRR892027
SRR892028 Yang2013 human GRO-seq LNCaP plusDHT_ASO_CTL_hs1517 SRR892028
SRR892029 Yang2013 human GRO-seq LNCaP plusDHT_ASO_PCGEM1_hs1514 SRR892029
SRR892030 Yang2013 human GRO-seq LNCaP plusDHT_ASO_PRNCR1_hs1517 SRR892030
SRR915731 Le2013 human GRO-seq MCF7/C4_12/Flag.ER_ vehicle SRR915731
SRR915732 Le2013 human GRO-seq MCF7/C4_12/Flag.ER_ vehicle SRR915732
SRR915733 Le2013 human GRO-seq MCF7/C4_12/Flag.ER_ E2_1hr SRR915733
SRR915734 Le2013 human GRO-seq MCF7/C4_12/Flag.ER_ E2_2hr SRR915734
SRR930649 Kaikkonen2013 mouse GRO-seq ThioMac notx_1hr SRZ930649
SRR930650 Kaikkonen2013 mouse GRO-seq ThioMac notx_1hr SRZ930649
SRR930651 Kaikkonen2013 mouse GRO-seq ThioMac notx_1hr SRZ930649
SRR930652 Kaikkonen2013 mouse GRO-seq ThioMac notx_1hr SRZ930649
SRR930653 Kaikkonen2013 mouse GRO-seq ThioMac notx_6hr SRZ930653
SRR930654 Kaikkonen2013 mouse GRO-seq ThioMac notx_6hr SRZ930653
SRR930655 Kaikkonen2013 mouse GRO-seq ThioMac notx_12hr SRZ930655
SRR930656 Kaikkonen2013 mouse GRO-seq ThioMac notx_12hr SRZ930655
SRR930657 Kaikkonen2013 mouse GRO-seq ThioMac notx_24hr SRZ930657
SRR930658 Kaikkonen2013 mouse GRO-seq ThioMac notx_12hr SRZ930657
SRR930659 Kaikkonen2013 mouse GRO-seq ThioMac KLA_1hr SRZ930659
SRR930660 Kaikkonen2013 mouse GRO-seq ThioMac KLA_1hr SRZ930659
SRR930661 Kaikkonen2013 mouse GRO-seq ThioMac KLA_1hr SRZ930659
SRR930662 Kaikkonen2013 mouse GRO-seq ThioMac KLA_1hr SRZ930659
SRR930663 Kaikkonen2013 mouse GRO-seq ThioMac KLA_6hr SRZ930663
SRR930664 Kaikkonen2013 mouse GRO-seq ThioMac KLA_6hr SRZ930663
SRR930665 Kaikkonen2013 mouse GRO-seq ThioMac KLA_12hr SRZ930665
SRR930666 Kaikkonen2013 mouse GRO-seq ThioMac KLA_12hr SRZ930665
SRR930667 Kaikkonen2013 mouse GRO-seq ThioMac KLA_24hr SRZ930667
SRR930668 Kaikkonen2013 mouse GRO-seq ThioMac KLA_24hr SRZ930667
SRR930669 Kaikkonen2013 mouse GRO-seq ThioMac notx SRR930669
SRR930670 Kaikkonen2013 mouse GRO-seq ThioMac KLA_10min SRR930670
SRR930671 Kaikkonen2013 mouse GRO-seq ThioMac KLA_1hr SRR930671
SRR930672 Kaikkonen2013 mouse GRO-seq ThioMac KLA_6hr SRR930672
SRR930673 Kaikkonen2013 mouse GRO-seq ThioMac KLA_12hr SRR930673
SRR930674 Kaikkonen2013 mouse GRO-seq ThioMac KLA_24hr SRR930674
SRR930675 Kaikkonen2013 mouse GRO-seq ThioMac notx SRR930675
SRR930676 Kaikkonen2013 mouse GRO-seq ThioMac notx SRR930676
SRR930677 Kaikkonen2013 mouse GRO-seq ThioMac notx SRZ930677
SRR930678 Kaikkonen2013 mouse GRO-seq ThioMac notx SRZ930677
SRR930679 Kaikkonen2013 mouse GRO-seq ThioMac KLA_1hr SRR930679
SRR930680 Kaikkonen2013 mouse GRO-seq ThioMac KLA_1hr SRR930680
SRR930681 Kaikkonen2013 mouse GRO-seq ThioMac KLA_6hr SRR930681
SRR930682 Kaikkonen2013 mouse GRO-seq ThioMac KLA_1hr SRZ930682
SRR930683 Kaikkonen2013 mouse GRO-seq ThioMac KLA_1hr SRZ930682
SRR930684 Kaikkonen2013 mouse GRO-seq ThioMac DMSO_2hr SRR930684
SRR930685 Kaikkonen2013 mouse GRO-seq ThioMac FP_2hr SRR930685
SRR930686 Kaikkonen2013 mouse GRO-seq ThioMac IBET_2hr SRR930686
SRR930687 Kaikkonen2013 mouse GRO-seq ThioMac DMSO_2hr+KLA_1hr SRR930687
SRR930688 Kaikkonen2013 mouse GRO-seq ThioMac FP_2hr+KLA_1hr SRR930688
SRR930689 Kaikkonen2013 mouse GRO-seq ThioMac IBET_2hr+KLA_1hr SRR930689
SRR930690 Kaikkonen2013 mouse GRO-seq ThioMac FP_2hr+KLA_1hr SRR930690
SRR930691 Kaikkonen2013 mouse GRO-seq ThioMac DMSO_2hr SRZ930691
SRR930692 Kaikkonen2013 mouse GRO-seq ThioMac DMSO_2hr SRZ930691
SRR930693 Kaikkonen2013 mouse GRO-seq ThioMac DMSO_2hr SRZ930691
SRR930694 Kaikkonen2013 mouse GRO-seq ThioMac DMSO_2hr SRZ930691
SRR930695 Kaikkonen2013 mouse GRO-seq ThioMac DMSO_2hr+KLA_1hr SRZ930695
SRR930696 Kaikkonen2013 mouse GRO-seq ThioMac DMSO_2hr+KLA_1hr SRZ930695
SRR930697 Kaikkonen2013 mouse GRO-seq ThioMac DMSO_2hr+KLA_1hr SRZ930695
SRR930698 Kaikkonen2013 mouse GRO-seq ThioMac DMSO_2hr+KLA_1hr SRZ930695
SRR930699 Kaikkonen2013 mouse GRO-seq ThioMac DMSO_2hr+KLA_1hr SRZ930695
SRR930700 Kaikkonen2013 mouse GRO-seq ThioMac DMSO_2hr+KLA_1hr SRZ930695
SRR930701 Kaikkonen2013 mouse GRO-seq ThioMac ActinomycinD_2hr+KLA_1hr SRZ930701
SRR930702 Kaikkonen2013 mouse GRO-seq ThioMac ActinomycinD_2hr+KLA_1hr SRZ930701
SRR930703 Kaikkonen2013 mouse GRO-seq ThioMac ActinomycinD_2hr+KLA_1hr SRZ930701
SRR930704 Kaikkonen2013 mouse GRO-seq ThioMac ActinomycinD_2hr+KLA_1hr SRZ930701
SRR930705 Kaikkonen2013 mouse GRO-seq ThioMac ActinomycinD_2hr+KLA_1hr SRZ930701
SRR930706 Kaikkonen2013 mouse GRO-seq ThioMac ActinomycinD_2hr+KLA_1hr SRZ930701
SRR930707 Kaikkonen2013 mouse GRO-seq ThioMac TRP_2hr+KLA_1hr SRZ930707
SRR930708 Kaikkonen2013 mouse GRO-seq ThioMac TRP_2hr+KLA_1hr SRZ930707
SRR930709 Kaikkonen2013 mouse GRO-seq ThioMac TRP_2hr+KLA_1hr SRZ930707
SRR930710 Kaikkonen2013 mouse GRO-seq ThioMac TRP_2hr+KLA_1hr SRZ930707
SRR930711 Kaikkonen2013 mouse GRO-seq ThioMac TRP_2hr+KLA_1hr SRZ930707
SRR930712 Kaikkonen2013 mouse GRO-seq ThioMac a-amanitin_5hr+KLA_1hr SRZ930712
SRR930713 Kaikkonen2013 mouse GRO-seq ThioMac a-amanitin_5hr+KLA_1hr SRZ930712
SRR930714 Kaikkonen2013 mouse GRO-seq ThioMac a-amanitin_5hr+KLA_1hr SRZ930712
SRR930715 Kaikkonen2013 mouse GRO-seq ThioMac a-amanitin_5hr+KLA_1hr SRZ930712
SRR930716 Kaikkonen2013 mouse GRO-seq ThioMac a-amanitin_5hr+KLA_1hr SRZ930712
SRR930717 Kaikkonen2013 mouse GRO-seq PU.1-/-myeloid notx_1hr SRR930717
SRR930718 Kaikkonen2013 mouse GRO-seq PU.1-/-myeloid KLA_1hr SRR930718
SRR930719 Kaikkonen2013 mouse GRO-seq PUER Tamoxifen_24hr SRR930719
SRR930720 Kaikkonen2013 mouse GRO-seq PUER Tamoxifen_24hr+KLA_1hr SRR930720
SRR935093 Jonkers2014 mouse GRO-seq v6.5 none SRZ935093
SRR935094 Jonkers2014 mouse GRO-seq v6.5 none SRZ935093
SRR935095 Jonkers2014 mouse GRO-seq v6.5 none SRZ935095
SRR935096 Jonkers2014 mouse GRO-seq v6.5 none SRZ935095
SRR935097 Jonkers2014 mouse GRO-seq v6.5 FP_2min SRZ935097
SRR935098 Jonkers2014 mouse GRO-seq v6.5 FP_2min SRZ935097
SRR935099 Jonkers2014 mouse GRO-seq v6.5 FP_2min SRZ935099
SRR935100 Jonkers2014 mouse GRO-seq v6.5 FP_2min SRZ935099
SRR935101 Jonkers2014 mouse GRO-seq v6.5 FP_5min SRZ935101
SRR935102 Jonkers2014 mouse GRO-seq v6.5 FP_5min SRZ935101
SRR935103 Jonkers2014 mouse GRO-seq v6.5 FP_5min SRZ935103
SRR935104 Jonkers2014 mouse GRO-seq v6.5 FP_5min SRZ935103
SRR935105 Jonkers2014 mouse GRO-seq v6.5 FP_12.5min SRZ935105
SRR935106 Jonkers2014 mouse GRO-seq v6.5 FP_12.5min SRZ935105
SRR935107 Jonkers2014 mouse GRO-seq v6.5 FP_12.5min SRZ935107
SRR935108 Jonkers2014 mouse GRO-seq v6.5 FP_12.5min SRZ935107
SRR935109 Jonkers2014 mouse GRO-seq v6.5 FP_25min SRZ935109
SRR935110 Jonkers2014 mouse GRO-seq v6.5 FP_25min SRZ935109
SRR935111 Jonkers2014 mouse GRO-seq v6.5 FP_25min SRZ935111
SRR935112 Jonkers2014 mouse GRO-seq v6.5 FP_25min SRZ935111
SRR935113 Jonkers2014 mouse GRO-seq v6.5 FP_50min SRZ935113
SRR935114 Jonkers2014 mouse GRO-seq v6.5 FP_50min SRZ935113
SRR935115 Jonkers2014 mouse GRO-seq v6.5 FP_50min SRZ935115
SRR935116 Jonkers2014 mouse GRO-seq v6.5 FP_50min SRZ935115
SRR935117 Jonkers2014 mouse GRO-seq v6.5 DMSO_50min SRR935117
SRR935118 Jonkers2014 mouse GRO-seq v6.5 DMSO_50min SRR935118
SRR935119 Jonkers2014 mouse GRO-seq v6.5 TRP_12.5min SRR935119
SRR935120 Jonkers2014 mouse GRO-seq v6.5 TRP_12.5min SRR935120
SRR935121 Jonkers2014 mouse GRO-seq v6.5 TRP_25min SRZ935121
SRR935122 Jonkers2014 mouse GRO-seq v6.5 TRP_25min SRZ935121
SRR935123 Jonkers2014 mouse GRO-seq v6.5 TRP_50min SRR935123
SRR935124 Jonkers2014 mouse GRO-seq v6.5 TRP_50min SRR935124
SRR942404 Saponaro2014 human GRO-seq HEK293T-rex_15_KD Doxycycline_0min SRZ942404
SRR942405 Saponaro2014 human GRO-seq HEK293T-rex_15_KD Doxycycline_0min SRZ942404
SRR942406 Saponaro2014 human GRO-seq HEK293T-rex_15_KD Doxycycline_0min SRZ942404
SRR942407 Saponaro2014 human GRO-seq HEK293T-rex_15_KD Doxycycline_10min SRZ942407
SRR942408 Saponaro2014 human GRO-seq HEK293T-rex_15_KD Doxycycline_10min SRZ942407
SRR942409 Saponaro2014 human GRO-seq HEK293T-rex_15_KD Doxycycline_10min SRZ942407
SRR942410 Saponaro2014 human GRO-seq HEK293T-rex_15_KD Doxycycline_25min SRZ942410
SRR942411 Saponaro2014 human GRO-seq HEK293T-rex_15_KD Doxycycline_25min SRZ942410
SRR942412 Saponaro2014 human GRO-seq HEK293T-rex_15_KD Doxycycline_25min SRZ942410
SRR942413 Saponaro2014 human GRO-seq HEK293T-rex_15_KD Doxycycline_40min SRZ942413
SRR942414 Saponaro2014 human GRO-seq HEK293T-rex_15_KD Doxycycline_40min SRZ942413
SRR942415 Saponaro2014 human GRO-seq HEK293T-rex_15_WT Doxycycline_0min SRZ942415
SRR942416 Saponaro2014 human GRO-seq HEK293T-rex_15_WT Doxycycline_0min SRZ942415
SRR942417 Saponaro2014 human GRO-seq HEK293T-rex_15_WT Doxycycline_0min SRZ942415
SRR942418 Saponaro2014 human GRO-seq HEK293T-rex_15_WT Doxycycline_10min SRZ942418
SRR942419 Saponaro2014 human GRO-seq HEK293T-rex_15_WT Doxycycline_10min SRZ942418
SRR942420 Saponaro2014 human GRO-seq HEK293T-rex_15_WT Doxycycline_10min SRZ942418
SRR942421 Saponaro2014 human GRO-seq HEK293T-rex_15_WT Doxycycline_25min SRZ942421
SRR942422 Saponaro2014 human GRO-seq HEK293T-rex_15_WT Doxycycline_25min SRZ942421
SRR942423 Saponaro2014 human GRO-seq HEK293T-rex_15_WT Doxycycline_40min SRZ942423
SRR942424 Saponaro2014 human GRO-seq HEK293T-rex_15_WT Doxycycline_40min SRZ942423
SRR942425 Saponaro2014 human GRO-seq HEK293T-rex_18_KD Doxycycline_0min SRZ942425
SRR942426 Saponaro2014 human GRO-seq HEK293T-rex_18_KD Doxycycline_0min SRZ942425
SRR942427 Saponaro2014 human GRO-seq HEK293T-rex_18_KD Doxycycline_0min SRZ942425
SRR942428 Saponaro2014 human GRO-seq HEK293T-rex_18_KD Doxycycline_0min SRZ942425
SRR942429 Saponaro2014 human GRO-seq HEK293T-rex_18_KD Doxycycline_10min SRZ942429
SRR942430 Saponaro2014 human GRO-seq HEK293T-rex_18_KD Doxycycline_10min SRZ942429
SRR942431 Saponaro2014 human GRO-seq HEK293T-rex_18_KD Doxycycline_10min SRZ942429
SRR942432 Saponaro2014 human GRO-seq HEK293T-rex_18_KD Doxycycline_10min SRZ942429
SRR942433 Saponaro2014 human GRO-seq HEK293T-rex_18_KD Doxycycline_25min SRZ942433
SRR942434 Saponaro2014 human GRO-seq HEK293T-rex_18_KD Doxycycline_25min SRZ942433
SRR942435 Saponaro2014 human GRO-seq HEK293T-rex_18_KD Doxycycline_25min SRZ942433
SRR942436 Saponaro2014 human GRO-seq HEK293T-rex_18_KD Doxycycline_40min SRZ942436
SRR942437 Saponaro2014 human GRO-seq HEK293T-rex_18_KD Doxycycline_40min SRZ942436
SRR942438 Saponaro2014 human GRO-seq HEK293T-rex_18_KD Doxycycline_40min SRZ942436
SRR942439 Saponaro2014 human GRO-seq HEK293T-rex_18_WT Doxycycline_0min SRZ942439
SRR942440 Saponaro2014 human GRO-seq HEK293T-rex_18_WT Doxycycline_0min SRZ942439
SRR942441 Saponaro2014 human GRO-seq HEK293T-rex_18_WT Doxycycline_0min SRZ942439
SRR942442 Saponaro2014 human GRO-seq HEK293T-rex_18_WT Doxycycline_0min SRZ942439
SRR942443 Saponaro2014 human GRO-seq HEK293T-rex_18_WT Doxycycline_10min SRZ942443
SRR942444 Saponaro2014 human GRO-seq HEK293T-rex_18_WT Doxycycline_10min SRZ942443
SRR942445 Saponaro2014 human GRO-seq HEK293T-rex_18_WT Doxycycline_10min SRZ942443
SRR942446 Saponaro2014 human GRO-seq HEK293T-rex_18_WT Doxycycline_25min SRZ942446
SRR942447 Saponaro2014 human GRO-seq HEK293T-rex_18_WT Doxycycline_25min SRZ942446
SRR942448 Saponaro2014 human GRO-seq HEK293T-rex_18_WT Doxycycline_25min SRZ942446
SRR942449 Saponaro2014 human GRO-seq HEK293T-rex_18_WT Doxycycline_40min SRZ942449
SRR942450 Saponaro2014 human GRO-seq HEK293T-rex_18_WT Doxycycline_40min SRZ942449
SRR942451 Saponaro2014 human GRO-seq HEK293T-rex_18_WT Doxycycline_40min SRZ942449
SRR988329 Li2013b mouse GRO-seq ThioMac notx SRR988329
SRR988330 Li2013b mouse GRO-seq ThioMac notx SRR988330
SRR988331 Li2013b mouse GRO-seq ThioMac notx SRR988331
SRR988332 Li2013b mouse GRO-seq ThioMac notx SRR988332
SRR988333 Li2013b mouse GRO-seq ThioMac notx SRR988333
SRR988334 Li2013b mouse GRO-seq ThioMac-NCoRKO notx SRR988334
SRR988335 Li2013b mouse GRO-seq ThioMac-NCoRKO notx SRR988335
SRR988336 Li2013b mouse GRO-seq ThioMac-NCoRKO notx SRR988336
SRR988337 Li2013b mouse GRO-seq ThioMac-NCoRKO notx SRR988337
SRR988338 Li2013b mouse GRO-seq ThioMac KLA_1hr SRR988338
SRR988339 Li2013b mouse GRO-seq ThioMac KLA_1hr SRR988339
SRR988340 Li2013b mouse GRO-seq ThioMac KLA_1hr SRR988340
SRR988341 Li2013b mouse GRO-seq ThioMac-NCoRKO KLA_1hr SRR988341
SRR988342 Li2013b mouse GRO-seq ThioMac-NCoRKO KLA_1hr SRR988342
SRR988343 Li2013b mouse GRO-seq ThioMac KLA_12hr SRR988343
SRR988344 Li2013b mouse GRO-seq ThioMac KLA_12hr SRR988344
SRR988345 Li2013b mouse GRO-seq ThioMac-NCoRKO KLA_12hr SRR988345
SRR988346 Li2013b mouse GRO-seq ThioMac-NCoRKO KLA_12hr SRR988346
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