DBNascent | Samples

SRR10582204 Sample ID 728

**Data sources**
Paper identifier	Fan2020drb
SRP accession	SRP234556
GEO accession	GSE141373
Samples	SRR10582204

**Technical details**
QC score	2
Replicate	1
Protocol	PRO-seq
Library prep	random primed
Spike-in	None
Single/Paired end	single
Raw strandedness	reverse
Reverse complemented?	True
Mapped strandedness	forward
Timecourse	True
Control/Experimental	experimental
Wildtype & Untreated?	False
Outlier	No
Unusable	No

**Downloads**
TDF visualization file	TDF file	83 Mb
Stranded gene read counts	TXT file	1 Mb
Unstranded bidirectional read counts	TXT file	21 Mb
Tfit bidirectional regions	BED file	4 Mb
dREG bidirectional regions	BED file	961 Kb
All data files	ZIP archive

**Cellular details**
Organism	H. sapiens
Sample type	cell line
Cell type	MV4-11
Clone/Individual
Strain
Genotype
Construct

**Conditions and treatments**
Condition type	Treatment	Start time	End time	Duration
treatment	DRB (100 microM)	-4 hr	0 hr	4 hr
vehicle	DMSO	-4 hr	0 hr	4 hr

**Extended notes**
Pipeline info and software versions
Sample notes
Analysis notes

**Sample metrics**
Sample QC score	2
Sample NRO score	3
Raw read length	75
Read depth after trimming	38,385,976
Duplication proportion	0.6396
Proportion reads mapped	0.8953
Exon/intron ratio	5.89113
Unique read proportion	0.43651

**Bidirectionals**
Total # Tfit bidirectionals	43307
# Promoter Tfit bidirectionals	13977
# Intronic Tfit bidirectionals	19274
# Intergenic Tfit bidirectionals	7317
Total # dREG bidirectionals	21784
# Promoter dREG bidirectionals	5630
# Intronic dREG bidirectionals	10356
# Intergenic dREG bidirectionals	4592
Part of Tfit master merge?	False
Part of dREG master merge?	False