DBNascent | Samples

SRR10582216 Sample ID 740

**Data sources**
Paper identifier	Fan2020drb
SRP accession	SRP234556
GEO accession	GSE141373
Samples	SRR10582216

**Technical details**
QC score	4
Replicate	1
Protocol	PRO-seq
Library prep	random primed
Spike-in	None
Single/Paired end	single
Raw strandedness	reverse
Reverse complemented?	True
Mapped strandedness	forward
Timecourse	False
Control/Experimental	experimental
Wildtype & Untreated?	False
Outlier	No
Unusable	Yes

**Downloads**
TDF visualization file	TDF file	41 Mb
Stranded gene read counts	TXT file	1 Mb
Unstranded bidirectional read counts	TXT file	21 Mb
Tfit bidirectional regions	BED file	592 Kb
dREG bidirectional regions	BED file	149 Kb
All data files	ZIP archive

**Cellular details**
Organism	H. sapiens
Sample type	cell line
Cell type	MV4-11
Clone/Individual
Strain
Genotype
Construct

**Conditions and treatments**
Condition type	Treatment	Start time	End time	Duration
treatment	various	None	None	None

**Extended notes**
Pipeline info and software versions
Sample notes	Pooled all DRB/THZ531 experiments
Analysis notes

**Sample metrics**
Sample QC score	4
Sample NRO score	3
Raw read length	75
Read depth after trimming	68,833,286
Duplication proportion	0.91065
Proportion reads mapped	0.9276
Exon/intron ratio	5.17698
Unique read proportion	0.10353

**Bidirectionals**
Total # Tfit bidirectionals	6809
# Promoter Tfit bidirectionals	2089
# Intronic Tfit bidirectionals	2786
# Intergenic Tfit bidirectionals	173
Total # dREG bidirectionals	3472
# Promoter dREG bidirectionals	1768
# Intronic dREG bidirectionals	1070
# Intergenic dREG bidirectionals	309
Part of Tfit master merge?	False
Part of dREG master merge?	False