DBNascent | Samples

SRR11811948 Sample ID 1009

**Data sources**
Paper identifier	Huang2020integrator
SRP accession	SRP262320
GEO accession	GSE150844
Samples	SRR11811948

**Technical details**
QC score	4
Replicate	1
Protocol	PRO-seq
Library prep	ligation
Spike-in	H. sapiens
Single/Paired end	paired
Raw strandedness	read1 reverse
Reverse complemented?	False
Mapped strandedness	read1 reverse
Timecourse	False
Control/Experimental	experimental
Wildtype & Untreated?	False
Outlier	No
Unusable	No

**Downloads**
TDF visualization file	TDF file	64 Mb
Stranded gene read counts	TXT file	723 Kb
Unstranded bidirectional read counts	TXT file
Tfit bidirectional regions	BED file
dREG bidirectional regions	BED file
All data files	ZIP archive

**Cellular details**
Organism	D. melanogaster
Sample type	cell line
Cell type	DL1
Clone/Individual
Strain
Genotype	copper-inducible FLAG-IntS8-WFEF/A mut (stable)
Construct

**Conditions and treatments**
Condition type	Treatment	Start time	End time	Duration
treatment	copper sulfate (200 microM)	-24 hr	0 hr	1 day
treatment	dsRNA IntS8 (10 microg/well)	-60 hr	0 hr	60 hr

**Extended notes**
Pipeline info and software versions
Sample notes
Analysis notes

**Sample metrics**
Sample QC score	4
Sample NRO score	2
Raw read length	42
Read depth after trimming	11,014,102
Duplication proportion	0.35483
Proportion reads mapped	0.7218
Exon/intron ratio	3.51654
Unique read proportion	0.40338

**Bidirectionals**
Total # Tfit bidirectionals	None
# Promoter Tfit bidirectionals	None
# Intronic Tfit bidirectionals	None
# Intergenic Tfit bidirectionals	None
Total # dREG bidirectionals	None
# Promoter dREG bidirectionals	None
# Intronic dREG bidirectionals	None
# Intergenic dREG bidirectionals	None
Part of Tfit master merge?	False
Part of dREG master merge?	False