DBNascent | Samples

SRR12482692 Sample ID 876

**Data sources**
Paper identifier	Gally2020gain
SRP accession	SRP278196
GEO accession	GSE156541
Samples	SRR12482692

**Technical details**
QC score	3
Replicate	1
Protocol	PRO-seq
Library prep	ligation
Spike-in	None
Single/Paired end	single
Raw strandedness	reverse
Reverse complemented?	True
Mapped strandedness	forward
Timecourse	False
Control/Experimental	control
Wildtype & Untreated?	True
Outlier	No
Unusable	No

**Downloads**
TDF visualization file	TDF file	123 Mb
Stranded gene read counts	TXT file	1 Mb
Unstranded bidirectional read counts	TXT file	21 Mb
Tfit bidirectional regions	BED file	3 Mb
dREG bidirectional regions	BED file	1 Mb
All data files	ZIP archive

**Cellular details**
Organism	H. sapiens
Sample type	cell line
Cell type	BEAS-2B
Clone/Individual
Strain
Genotype
Construct

**Conditions and treatments**
Condition type	Treatment	Start time	End time	Duration
no treatment		None	None	None

**Extended notes**
Pipeline info and software versions
Sample notes
Analysis notes

**Sample metrics**
Sample QC score	3
Sample NRO score	2
Raw read length	76
Read depth after trimming	75,166,278
Duplication proportion	0.76849
Proportion reads mapped	0.9261
Exon/intron ratio	4.53811
Unique read proportion	0.5966

**Bidirectionals**
Total # Tfit bidirectionals	36723
# Promoter Tfit bidirectionals	15361
# Intronic Tfit bidirectionals	14625
# Intergenic Tfit bidirectionals	7216
Total # dREG bidirectionals	27218
# Promoter dREG bidirectionals	7786
# Intronic dREG bidirectionals	12208
# Intergenic dREG bidirectionals	5634
Part of Tfit master merge?	True
Part of dREG master merge?	True