DBNascent | Samples

SRR2153508 Sample ID 2130

**Data sources**
Paper identifier	Salony2016akt
SRP	SRP062229
Samples	SRR2153508

**Technical details**
QC score	5
Replicate	1
Protocol	GRO-seq
Library prep	ligation
Spike-in	None
Single/Paired end	single
Timecourse	False
Control/Experimental	experimental
Outlier	No
Unusable	No

**Downloads**
TDF visualization file	TDF file	29 Mb
Stranded gene read counts	TXT file	1 Mb
Unstranded bidirectional read counts	TXT file	21 Mb
Tfit bidirectional regions	BED file	113 Kb
dREG bidirectional regions	BED file	91 Kb
All data files	ZIP archive

**Cellular details**
Organism	H. sapiens
Sample type	cell line
Cell type	MCF7
Clone/Individual
Strain
Genotype
Construct

**Conditions and treatments**
Condition type	Treatment	Start time	End time	Duration
treatment	AKTi-1/2 (2 microM)	-72 hr	0 hr	3 day

**Extended notes**
Pipeline info and software versions
Sample notes
Analysis notes	Ran qc redo nextflow

**Sample metrics**
Sample QC score	5
Sample NRO score	3
Raw read length	50
Read depth after trimming	93,416,741
Duplication proportion	0.95591
Proportion reads mapped	0.5326
Exon/intron ratio	1.71421
Unique read proportion	0.11308

**Bidirectionals**
Total # Tfit bidirectionals	1336
# Promoter Tfit bidirectionals	262
# Intronic Tfit bidirectionals	843
# Intergenic Tfit bidirectionals	116
Total # dREG bidirectionals	2116
# Promoter dREG bidirectionals	80
# Intronic dREG bidirectionals	1518
# Intergenic dREG bidirectionals	258
Part of Tfit master merge?	True
Part of dREG master merge?	True