DBNascent | Samples

SRR2153509 Sample ID 2131

**Data sources**
Paper identifier	Salony2016akt
SRP	SRP062229
Samples	SRR2153509

**Technical details**
QC score	5
Replicate	2
Protocol	GRO-seq
Library prep	ligation
Spike-in	None
Single/Paired end	single
Timecourse	False
Control/Experimental	experimental
Outlier	No
Unusable	No

**Downloads**
TDF visualization file	TDF file	29 Mb
Stranded gene read counts	TXT file	1 Mb
Unstranded bidirectional read counts	TXT file	21 Mb
Tfit bidirectional regions	BED file	82 Kb
dREG bidirectional regions	BED file	134 Kb
All data files	ZIP archive

**Cellular details**
Organism	H. sapiens
Sample type	cell line
Cell type	MCF7
Clone/Individual
Strain
Genotype
Construct

**Conditions and treatments**
Condition type	Treatment	Start time	End time	Duration
treatment	AKTi-1/2 (2 microM)	-72 hr	0 hr	3 day

**Extended notes**
Pipeline info and software versions
Sample notes
Analysis notes	Ran qc redo nextflow

**Sample metrics**
Sample QC score	5
Sample NRO score	5
Raw read length	50
Read depth after trimming	87,679,478
Duplication proportion	0.96596
Proportion reads mapped	0.6926
Exon/intron ratio	1.40394
Unique read proportion	0.13509

**Bidirectionals**
Total # Tfit bidirectionals	962
# Promoter Tfit bidirectionals	84
# Intronic Tfit bidirectionals	681
# Intergenic Tfit bidirectionals	88
Total # dREG bidirectionals	3111
# Promoter dREG bidirectionals	44
# Intronic dREG bidirectionals	2400
# Intergenic dREG bidirectionals	355
Part of Tfit master merge?	True
Part of dREG master merge?	True