DBNascent | Samples

SRR352505 Sample ID 1205

**Data sources**
Paper identifier	Khodor2011nascent
SRP accession	SRP008848
GEO accession	GSE32950
Samples	SRR352505

**Technical details**
QC score	2
Replicate	1
Protocol	RNA-seq variant
Library prep	ligation
Spike-in	None
Single/Paired end	single
Raw strandedness	reverse
Reverse complemented?	True
Mapped strandedness	forward
Timecourse	False
Control/Experimental	control
Wildtype & Untreated?	True
Outlier	No
Unusable	No

**Downloads**
TDF visualization file	TDF file	73 Mb
Stranded gene read counts	TXT file	718 Kb
Unstranded bidirectional read counts	TXT file
Tfit bidirectional regions	BED file
dREG bidirectional regions	BED file
All data files	ZIP archive

**Cellular details**
Organism	D. melanogaster
Sample type	tissue
Cell type	head
Clone/Individual
Strain
Genotype
Construct

**Conditions and treatments**
Condition type	Treatment	Start time	End time	Duration
no treatment		None	None	None

**Extended notes**
Pipeline info and software versions
Sample notes	ChrRNA-Seq
Analysis notes	Unstranded

**Sample metrics**
Sample QC score	2
Sample NRO score	1
Raw read length	76
Read depth after trimming	17,526,397
Duplication proportion	0.63536
Proportion reads mapped	0.8671
Exon/intron ratio	2.32195
Unique read proportion	0.36033

**Bidirectionals**
Total # Tfit bidirectionals	None
# Promoter Tfit bidirectionals	None
# Intronic Tfit bidirectionals	None
# Intergenic Tfit bidirectionals	None
Total # dREG bidirectionals	None
# Promoter dREG bidirectionals	None
# Intronic dREG bidirectionals	None
# Intergenic dREG bidirectionals	None
Part of Tfit master merge?	False
Part of dREG master merge?	False