DBNascent | Samples

SRR3535362 Sample ID 2733

**Data sources**
Paper identifier	Yang2017glucocorticoid
SRP	SRP075268
Samples	SRR3535362

**Technical details**
QC score	1
Replicate	1
Protocol	GRO-seq
Library prep	circularization
Spike-in	None
Single/Paired end	single
Timecourse	False
Control/Experimental	experimental
Outlier	No
Unusable	No

**Downloads**
TDF visualization file	TDF file	118 Mb
Stranded gene read counts	TXT file	1 Mb
Unstranded bidirectional read counts	TXT file	21 Mb
Tfit bidirectional regions	BED file	2 Mb
dREG bidirectional regions	BED file	822 Kb
All data files	ZIP archive

**Cellular details**
Organism	H. sapiens
Sample type	cell line
Cell type	MCF7
Clone/Individual
Strain
Genotype
Construct

**Conditions and treatments**
Condition type	Treatment	Start time	End time	Duration
treatment	ICI 182,780 (100 nM)	-3 hr	0 hr	3 hr

**Extended notes**
Pipeline info and software versions
Sample notes
Analysis notes

**Sample metrics**
Sample QC score	1
Sample NRO score	1
Raw read length	50
Read depth after trimming	40,054,831
Duplication proportion	0.49531
Proportion reads mapped	0.9237
Exon/intron ratio	2.63085
Unique read proportion	0.55169

**Bidirectionals**
Total # Tfit bidirectionals	22828
# Promoter Tfit bidirectionals	9578
# Intronic Tfit bidirectionals	8995
# Intergenic Tfit bidirectionals	4254
Total # dREG bidirectionals	18956
# Promoter dREG bidirectionals	7895
# Intronic dREG bidirectionals	7593
# Intergenic dREG bidirectionals	3689
Part of Tfit master merge?	True
Part of dREG master merge?	True