DBNascent | Samples

SRR5085736 Sample ID 2668

**Data sources**
Paper identifier	Williamson2017uv
SRP	SRP094802
Samples	SRR5085736

**Technical details**
QC score	1
Replicate	1
Protocol	GRO-seq
Library prep	ligation
Spike-in	None
Single/Paired end	single
Timecourse	True
Control/Experimental	control
Outlier	No
Unusable	No

**Downloads**
TDF visualization file	TDF file	274 Mb
Stranded gene read counts	TXT file	1 Mb
Unstranded bidirectional read counts	TXT file	21 Mb
Tfit bidirectional regions	BED file	2 Mb
dREG bidirectional regions	BED file	1 Mb
All data files	ZIP archive

**Cellular details**
Organism	H. sapiens
Sample type	cell line
Cell type	MRC5VA
Clone/Individual
Strain
Genotype
Construct

**Conditions and treatments**
Condition type	Treatment	Start time	End time	Duration
treatment	DRB (100 microM)	-250 min	-40 min	210 min

**Extended notes**
Pipeline info and software versions
Sample notes	No documented irradiation duration, arbitrarily called 1 second
Analysis notes

**Sample metrics**
Sample QC score	1
Sample NRO score	2
Raw read length	51
Read depth after trimming	72,540,010
Duplication proportion	0.33829
Proportion reads mapped	0.9078
Exon/intron ratio	4.35525
Unique read proportion	0.8533

**Bidirectionals**
Total # Tfit bidirectionals	26890
# Promoter Tfit bidirectionals	5415
# Intronic Tfit bidirectionals	11818
# Intergenic Tfit bidirectionals	6983
Total # dREG bidirectionals	24161
# Promoter dREG bidirectionals	4463
# Intronic dREG bidirectionals	11953
# Intergenic dREG bidirectionals	6332
Part of Tfit master merge?	True
Part of dREG master merge?	True