DBNascent | Samples

SRR6205689 Sample ID 2240

**Data sources**
Paper identifier	Sen2019histone
SRP accession	SRP121032
GEO accession	GSE105936
Samples	SRR6205689

**Technical details**
QC score	2
Replicate	1
Protocol	PRO-seq
Library prep	ligation
Spike-in	None
Single/Paired end	single
Raw strandedness	reverse
Reverse complemented?	True
Mapped strandedness	forward
Timecourse	False
Control/Experimental	experimental
Wildtype & Untreated?	False
Outlier	No
Unusable	No

**Downloads**
TDF visualization file	TDF file	85 Mb
Stranded gene read counts	TXT file	1 Mb
Unstranded bidirectional read counts	TXT file	21 Mb
Tfit bidirectional regions	BED file	4 Mb
dREG bidirectional regions	BED file	2 Mb
All data files	ZIP archive

**Cellular details**
Organism	H. sapiens
Sample type	cell line
Cell type	IMR90
Clone/Individual
Strain
Genotype
Construct

**Conditions and treatments**
Condition type	Treatment	Start time	End time	Duration
treatment	replicatively passaging until senescent	None	None	None

**Extended notes**
Pipeline info and software versions
Sample notes
Analysis notes

**Sample metrics**
Sample QC score	2
Sample NRO score	2
Raw read length	35
Read depth after trimming	31,040,368
Duplication proportion	0.55685
Proportion reads mapped	0.8556
Exon/intron ratio	3.52784
Unique read proportion	0.55314

**Bidirectionals**
Total # Tfit bidirectionals	43427
# Promoter Tfit bidirectionals	10710
# Intronic Tfit bidirectionals	21625
# Intergenic Tfit bidirectionals	10998
Total # dREG bidirectionals	38590
# Promoter dREG bidirectionals	9163
# Intronic dREG bidirectionals	19254
# Intergenic dREG bidirectionals	9855
Part of Tfit master merge?	True
Part of dREG master merge?	True