DBNascent | Samples

SRR6498835 Sample ID 2661

**Data sources**
Paper identifier	Weissmiller2019inhibition
SRP accession	SRP131080
GEO accession	GSE109310
Samples	SRR6498835

**Technical details**
QC score	1
Replicate	3
Protocol	PRO-seq
Library prep	ligation
Spike-in	None
Single/Paired end	single
Raw strandedness	reverse
Reverse complemented?	True
Mapped strandedness	forward
Timecourse	False
Control/Experimental	experimental
Wildtype & Untreated?	False
Outlier	No
Unusable	No

**Downloads**
TDF visualization file	TDF file	385 Mb
Stranded gene read counts	TXT file	1 Mb
Unstranded bidirectional read counts	TXT file	21 Mb
Tfit bidirectional regions	BED file	3 Mb
dREG bidirectional regions	BED file	2 Mb
All data files	ZIP archive

**Cellular details**
Organism	H. sapiens
Sample type	cell line
Cell type	G401
Clone/Individual
Strain
Genotype	dox-inducible OMO-MYC (stable)
Construct

**Conditions and treatments**
Condition type	Treatment	Start time	End time	Duration
treatment	doxycycline (1 microg/mL)	-24 hr	0 hr	1 day

**Extended notes**
Pipeline info and software versions
Sample notes
Analysis notes

**Sample metrics**
Sample QC score	1
Sample NRO score	1
Raw read length	75
Read depth after trimming	124,683,476
Duplication proportion	0.46324
Proportion reads mapped	0.899
Exon/intron ratio	2.64176
Unique read proportion	0.78662

**Bidirectionals**
Total # Tfit bidirectionals	37841
# Promoter Tfit bidirectionals	14215
# Intronic Tfit bidirectionals	14143
# Intergenic Tfit bidirectionals	9351
Total # dREG bidirectionals	41381
# Promoter dREG bidirectionals	7922
# Intronic dREG bidirectionals	19050
# Intergenic dREG bidirectionals	12952
Part of Tfit master merge?	True
Part of dREG master merge?	True