DBNascent | Samples

SRR6927838 Sample ID 1523

**Data sources**
Paper identifier	Liang2018targeting
SRP accession	SRP136956
GEO accession	GSE112608
Samples	SRR6927838

**Technical details**
QC score	1
Replicate	1
Protocol	PRO-seq
Library prep	ligation
Spike-in	None
Single/Paired end	single
Raw strandedness	reverse
Reverse complemented?	True
Mapped strandedness	forward
Timecourse	False
Control/Experimental	experimental
Wildtype & Untreated?	False
Outlier	No
Unusable	No

**Downloads**
TDF visualization file	TDF file	116 Mb
Stranded gene read counts	TXT file	1 Mb
Unstranded bidirectional read counts	TXT file	21 Mb
Tfit bidirectional regions	BED file	2 Mb
dREG bidirectional regions	BED file	868 Kb
All data files	ZIP archive

**Cellular details**
Organism	H. sapiens
Sample type	cell line
Cell type	HEK293T
Clone/Individual
Strain
Genotype
Construct

**Conditions and treatments**
Condition type	Treatment	Start time	End time	Duration
treatment	KL-1 (20 microM)	-6 hr	0 hr	6 hr

**Extended notes**
Pipeline info and software versions
Sample notes
Analysis notes

**Sample metrics**
Sample QC score	1
Sample NRO score	2
Raw read length	20
Read depth after trimming	36,018,578
Duplication proportion	0.40072
Proportion reads mapped	0.8777
Exon/intron ratio	4.05714
Unique read proportion	0.70068

**Bidirectionals**
Total # Tfit bidirectionals	27007
# Promoter Tfit bidirectionals	16166
# Intronic Tfit bidirectionals	9804
# Intergenic Tfit bidirectionals	2233
Total # dREG bidirectionals	19888
# Promoter dREG bidirectionals	9844
# Intronic dREG bidirectionals	7969
# Intergenic dREG bidirectionals	2485
Part of Tfit master merge?	True
Part of dREG master merge?	True