DBNascent | Samples

SRR6927839 Sample ID 1524

**Data sources**
Paper identifier	Liang2018targeting
SRP accession	SRP136956
GEO accession	GSE112608
Samples	SRR6927839

**Technical details**
QC score	1
Replicate	1
Protocol	PRO-seq
Library prep	ligation
Spike-in	None
Single/Paired end	single
Raw strandedness	reverse
Reverse complemented?	True
Mapped strandedness	forward
Timecourse	False
Control/Experimental	control
Wildtype & Untreated?	True
Outlier	No
Unusable	No

**Downloads**
TDF visualization file	TDF file	154 Mb
Stranded gene read counts	TXT file	1 Mb
Unstranded bidirectional read counts	TXT file	21 Mb
Tfit bidirectional regions	BED file	3 Mb
dREG bidirectional regions	BED file	1 Mb
All data files	ZIP archive

**Cellular details**
Organism	H. sapiens
Sample type	cell line
Cell type	HEK293T
Clone/Individual
Strain
Genotype
Construct

**Conditions and treatments**
Condition type	Treatment	Start time	End time	Duration
vehicle	DMSO	-6 hr	0 hr	6 hr

**Extended notes**
Pipeline info and software versions
Sample notes
Analysis notes

**Sample metrics**
Sample QC score	1
Sample NRO score	2
Raw read length	20
Read depth after trimming	43,221,197
Duplication proportion	0.35575
Proportion reads mapped	0.9079
Exon/intron ratio	3.45305
Unique read proportion	0.74044

**Bidirectionals**
Total # Tfit bidirectionals	37814
# Promoter Tfit bidirectionals	21907
# Intronic Tfit bidirectionals	12365
# Intergenic Tfit bidirectionals	4848
Total # dREG bidirectionals	23880
# Promoter dREG bidirectionals	10082
# Intronic dREG bidirectionals	9157
# Intergenic dREG bidirectionals	4421
Part of Tfit master merge?	True
Part of dREG master merge?	True