DBNascent | Samples

SRR7266931 Sample ID 29

**Data sources**
Paper identifier	Aho2019displacement
SRP accession	SRP149838
GEO accession	GSE115377
Samples	SRR7266931

**Technical details**
QC score	1
Replicate	1
Protocol	PRO-seq
Library prep	ligation
Spike-in	None
Single/Paired end	single
Raw strandedness	reverse
Reverse complemented?	True
Mapped strandedness	forward
Timecourse	True
Control/Experimental	control
Wildtype & Untreated?	True
Outlier	No
Unusable	No

**Downloads**
TDF visualization file	TDF file	120 Mb
Stranded gene read counts	TXT file	1 Mb
Unstranded bidirectional read counts	TXT file	21 Mb
Tfit bidirectional regions	BED file	3 Mb
dREG bidirectional regions	BED file	1 Mb
All data files	ZIP archive

**Cellular details**
Organism	H. sapiens
Sample type	cell line
Cell type	MV4-11
Clone/Individual
Strain
Genotype
Construct

**Conditions and treatments**
Condition type	Treatment	Start time	End time	Duration
vehicle	DMSO	-60 min	0 min	1 hr

**Extended notes**
Pipeline info and software versions
Sample notes
Analysis notes

**Sample metrics**
Sample QC score	1
Sample NRO score	2
Raw read length	75
Read depth after trimming	36,189,411
Duplication proportion	0.39838
Proportion reads mapped	0.8191
Exon/intron ratio	3.69854
Unique read proportion	0.69112

**Bidirectionals**
Total # Tfit bidirectionals	30302
# Promoter Tfit bidirectionals	11009
# Intronic Tfit bidirectionals	13192
# Intergenic Tfit bidirectionals	5862
Total # dREG bidirectionals	26710
# Promoter dREG bidirectionals	8904
# Intronic dREG bidirectionals	11746
# Intergenic dREG bidirectionals	5612
Part of Tfit master merge?	True
Part of dREG master merge?	True