DBNascent | Samples

SRR7266932 Sample ID 30

**Data sources**
Paper identifier	Aho2019displacement
SRP accession	SRP149838
GEO accession	GSE115377
Samples	SRR7266932

**Technical details**
QC score	2
Replicate	2
Protocol	PRO-seq
Library prep	ligation
Spike-in	None
Single/Paired end	single
Raw strandedness	reverse
Reverse complemented?	True
Mapped strandedness	forward
Timecourse	True
Control/Experimental	control
Wildtype & Untreated?	True
Outlier	No
Unusable	No

**Downloads**
TDF visualization file	TDF file	75 Mb
Stranded gene read counts	TXT file	1 Mb
Unstranded bidirectional read counts	TXT file	21 Mb
Tfit bidirectional regions	BED file	2 Mb
dREG bidirectional regions	BED file	840 Kb
All data files	ZIP archive

**Cellular details**
Organism	H. sapiens
Sample type	cell line
Cell type	MV4-11
Clone/Individual
Strain
Genotype
Construct

**Conditions and treatments**
Condition type	Treatment	Start time	End time	Duration
vehicle	DMSO	-60 min	0 min	1 hr

**Extended notes**
Pipeline info and software versions
Sample notes
Analysis notes

**Sample metrics**
Sample QC score	2
Sample NRO score	1
Raw read length	75
Read depth after trimming	18,573,270
Duplication proportion	0.32614
Proportion reads mapped	0.8069
Exon/intron ratio	2.88065
Unique read proportion	0.69283

**Bidirectionals**
Total # Tfit bidirectionals	23186
# Promoter Tfit bidirectionals	7802
# Intronic Tfit bidirectionals	10654
# Intergenic Tfit bidirectionals	4395
Total # dREG bidirectionals	19514
# Promoter dREG bidirectionals	8291
# Intronic dREG bidirectionals	7894
# Intergenic dREG bidirectionals	3635
Part of Tfit master merge?	True
Part of dREG master merge?	True