DBNascent | Samples

SRR7988486 Sample ID 2414

**Data sources**
Paper identifier	Takahashi2020role
SRP accession	SRP164752
GEO accession	GSE121024
Samples	SRR7988486

**Technical details**
QC score	2
Replicate	2
Protocol	PRO-seq
Library prep	ligation
Spike-in	D. melanogaster
Single/Paired end	single
Raw strandedness	reverse
Reverse complemented?	True
Mapped strandedness	forward
Timecourse	False
Control/Experimental	experimental
Wildtype & Untreated?	False
Outlier	No
Unusable	No

**Downloads**
TDF visualization file	TDF file	399 Mb
Stranded gene read counts	TXT file	1 Mb
Unstranded bidirectional read counts	TXT file	21 Mb
Tfit bidirectional regions	BED file	3 Mb
dREG bidirectional regions	BED file	2 Mb
All data files	ZIP archive

**Cellular details**
Organism	H. sapiens
Sample type	cell line
Cell type	HEK293T
Clone/Individual	D2G8
Strain
Genotype	Med26 mut
Construct

**Conditions and treatments**
Condition type	Treatment	Start time	End time	Duration
no treatment		None	None	None

**Extended notes**
Pipeline info and software versions
Sample notes
Analysis notes

**Sample metrics**
Sample QC score	2
Sample NRO score	2
Raw read length	76
Read depth after trimming	146,337,667
Duplication proportion	0.54098
Proportion reads mapped	0.8291
Exon/intron ratio	4.02151
Unique read proportion	0.79004

**Bidirectionals**
Total # Tfit bidirectionals	36965
# Promoter Tfit bidirectionals	18590
# Intronic Tfit bidirectionals	12926
# Intergenic Tfit bidirectionals	5931
Total # dREG bidirectionals	40509
# Promoter dREG bidirectionals	8141
# Intronic dREG bidirectionals	19437
# Intergenic dREG bidirectionals	10720
Part of Tfit master merge?	True
Part of dREG master merge?	True