DBNascent | Samples

SRR8111714 Sample ID 1435

**Data sources**
Paper identifier	Leroy2019ledgf
SRP accession	SRP153901
GEO accession	GSE117155
Samples	SRR8111714

**Technical details**
QC score	3
Replicate	1
Protocol	PRO-seq
Library prep	ligation
Spike-in	D. melanogaster
Single/Paired end	single
Raw strandedness	reverse
Reverse complemented?	True
Mapped strandedness	forward
Timecourse	False
Control/Experimental	control
Wildtype & Untreated?	True
Outlier	No
Unusable	No

**Downloads**
TDF visualization file	TDF file	85 Mb
Stranded gene read counts	TXT file	1 Mb
Unstranded bidirectional read counts	TXT file	21 Mb
Tfit bidirectional regions	BED file	5 Mb
dREG bidirectional regions	BED file	2 Mb
All data files	ZIP archive

**Cellular details**
Organism	H. sapiens
Sample type	primary cell
Cell type	myoblast
Clone/Individual
Strain
Genotype
Construct

**Conditions and treatments**
Condition type	Treatment	Start time	End time	Duration
no treatment		None	None	None

**Extended notes**
Pipeline info and software versions
Sample notes
Analysis notes

**Sample metrics**
Sample QC score	3
Sample NRO score	2
Raw read length	35
Read depth after trimming	77,751,401
Duplication proportion	0.6603
Proportion reads mapped	0.4297
Exon/intron ratio	4.96735
Unique read proportion	0.47915

**Bidirectionals**
Total # Tfit bidirectionals	59388
# Promoter Tfit bidirectionals	16138
# Intronic Tfit bidirectionals	26475
# Intergenic Tfit bidirectionals	17322
Total # dREG bidirectionals	52094
# Promoter dREG bidirectionals	12083
# Intronic dREG bidirectionals	24759
# Intergenic dREG bidirectionals	15265
Part of Tfit master merge?	True
Part of dREG master merge?	True