DBNascent | Samples

SRR8812163 Sample ID 605

**Data sources**
Paper identifier	Douillet2020uncoupling
SRP accession	SRP189864
GEO accession	GSE129037
Samples	SRR8812163

**Technical details**
QC score	2
Replicate	1
Protocol	PRO-seq
Library prep	ligation
Spike-in	D. melanogaster
Single/Paired end	single
Raw strandedness	reverse
Reverse complemented?	True
Mapped strandedness	forward
Timecourse	False
Control/Experimental	control
Wildtype & Untreated?	False
Outlier	No
Unusable	No

**Downloads**
TDF visualization file	TDF file	206 Mb
Stranded gene read counts	TXT file	935 Kb
Unstranded bidirectional read counts	TXT file	17 Mb
Tfit bidirectional regions	BED file	6 Mb
dREG bidirectional regions	BED file	3 Mb
All data files	ZIP archive

**Cellular details**
Organism	M. musculus
Sample type	cell line
Cell type	ESC
Clone/Individual	V6.5
Strain
Genotype	shRNA control (stable)
Construct

**Conditions and treatments**
Condition type	Treatment	Start time	End time	Duration
no treatment		None	None	None

**Extended notes**
Pipeline info and software versions
Sample notes
Analysis notes

**Sample metrics**
Sample QC score	2
Sample NRO score	3
Raw read length	16
Read depth after trimming	89,533,431
Duplication proportion	0.56771
Proportion reads mapped	0.8235
Exon/intron ratio	5.81021
Unique read proportion	0.63271

**Bidirectionals**
Total # Tfit bidirectionals	70833
# Promoter Tfit bidirectionals	21288
# Intronic Tfit bidirectionals	21854
# Intergenic Tfit bidirectionals	23283
Total # dREG bidirectionals	67873
# Promoter dREG bidirectionals	9948
# Intronic dREG bidirectionals	26009
# Intergenic dREG bidirectionals	26054
Part of Tfit master merge?	True
Part of dREG master merge?	True