DBNascent | Samples

SRR9304733 Sample ID 769

**Data sources**
Paper identifier	Fant2020tfiid
SRP accession	SRP201480
GEO accession	GSE132764
Samples	SRR9304733

**Technical details**
QC score	4
Replicate	2
Protocol	PRO-seq
Library prep	ligation
Spike-in	None
Single/Paired end	single
Raw strandedness	reverse
Reverse complemented?	True
Mapped strandedness	forward
Timecourse	False
Control/Experimental	control
Wildtype & Untreated?	False
Outlier	No
Unusable	No

**Downloads**
TDF visualization file	TDF file	65 Mb
Stranded gene read counts	TXT file
Unstranded bidirectional read counts	TXT file
Tfit bidirectional regions	BED file	670 Kb
dREG bidirectional regions	BED file	336 Kb
All data files	ZIP archive

**Cellular details**
Organism	D. melanogaster
Sample type	cell line
Cell type	S2
Clone/Individual
Strain
Genotype
Construct

**Conditions and treatments**
Condition type	Treatment	Start time	End time	Duration
treatment	dsRNA LacI (30 microg)	-60 hr	0 hr	60 hr

**Extended notes**
Pipeline info and software versions
Sample notes	Cites Mahat2016mammalian for protocol and library prep
Analysis notes

**Sample metrics**
Sample QC score	4
Sample NRO score	1
Raw read length	76
Read depth after trimming	43,516,764
Duplication proportion	0.85513
Proportion reads mapped	0.8419
Exon/intron ratio	1.89174
Unique read proportion	0.20498

**Bidirectionals**
Total # Tfit bidirectionals	None
# Promoter Tfit bidirectionals	None
# Intronic Tfit bidirectionals	None
# Intergenic Tfit bidirectionals	None
Total # dREG bidirectionals	None
# Promoter dREG bidirectionals	None
# Intronic dREG bidirectionals	None
# Intergenic dREG bidirectionals	None
Part of Tfit master merge?	False
Part of dREG master merge?	False