DBNascent | Samples

SRR9304737 Sample ID 773

**Data sources**
Paper identifier	Fant2020tfiid
SRP accession	SRP201480
GEO accession	GSE132764
Samples	SRR9304737

**Technical details**
QC score	4
Replicate	3
Protocol	PRO-seq
Library prep	ligation
Spike-in	None
Single/Paired end	single
Raw strandedness	reverse
Reverse complemented?	True
Mapped strandedness	forward
Timecourse	False
Control/Experimental	experimental
Wildtype & Untreated?	False
Outlier	No
Unusable	No

**Downloads**
TDF visualization file	TDF file	72 Mb
Stranded gene read counts	TXT file
Unstranded bidirectional read counts	TXT file
Tfit bidirectional regions	BED file	678 Kb
dREG bidirectional regions	BED file	384 Kb
All data files	ZIP archive

**Cellular details**
Organism	D. melanogaster
Sample type	cell line
Cell type	S2
Clone/Individual
Strain
Genotype
Construct

**Conditions and treatments**
Condition type	Treatment	Start time	End time	Duration
treatment	dsRNA Taf1 (30 microg)	-60 hr	0 hr	60 hr

**Extended notes**
Pipeline info and software versions
Sample notes	Cites Mahat2016mammalian for protocol and library prep
Analysis notes

**Sample metrics**
Sample QC score	4
Sample NRO score	1
Raw read length	76
Read depth after trimming	49,523,567
Duplication proportion	0.8358
Proportion reads mapped	0.8533
Exon/intron ratio	1.65913
Unique read proportion	0.22824

**Bidirectionals**
Total # Tfit bidirectionals	None
# Promoter Tfit bidirectionals	None
# Intronic Tfit bidirectionals	None
# Intergenic Tfit bidirectionals	None
Total # dREG bidirectionals	None
# Promoter dREG bidirectionals	None
# Intronic dREG bidirectionals	None
# Intergenic dREG bidirectionals	None
Part of Tfit master merge?	False
Part of dREG master merge?	False