DBNascent | Samples

SRR9825094 Sample ID 1509

**Data sources**
Paper identifier	Li2020signalosome
SRP accession	SRP216249
GEO accession	GSE134800
Samples	SRR9825094

**Technical details**
QC score	4
Replicate	2
Protocol	PRO-seq
Library prep	circularization
Spike-in	None
Single/Paired end	single
Raw strandedness	forward
Reverse complemented?	False
Mapped strandedness	forward
Timecourse	False
Control/Experimental	experimental
Wildtype & Untreated?	False
Outlier	No
Unusable	No

**Downloads**
TDF visualization file	TDF file	29 Mb
Stranded gene read counts	TXT file
Unstranded bidirectional read counts	TXT file
Tfit bidirectional regions	BED file
dREG bidirectional regions	BED file
All data files	ZIP archive

**Cellular details**
Organism	R. norvegicus
Sample type	primary cell
Cell type	cardiomyocyte
Clone/Individual
Strain
Genotype	Srf S103A (stable)
Construct

**Conditions and treatments**
Condition type	Treatment	Start time	End time	Duration
treatment	phenylephrine (20 microM)	-1 hr	0 hr	1 hr

**Extended notes**
Pipeline info and software versions
Sample notes
Analysis notes

**Sample metrics**
Sample QC score	4
Sample NRO score	3
Raw read length	75
Read depth after trimming	53,104,820
Duplication proportion	0.92006
Proportion reads mapped	0.8186
Exon/intron ratio	6.87636
Unique read proportion	0.08929

**Bidirectionals**
Total # Tfit bidirectionals	None
# Promoter Tfit bidirectionals	None
# Intronic Tfit bidirectionals	None
# Intergenic Tfit bidirectionals	None
Total # dREG bidirectionals	None
# Promoter dREG bidirectionals	None
# Intronic dREG bidirectionals	None
# Intergenic dREG bidirectionals	None
Part of Tfit master merge?	False
Part of dREG master merge?	False