DBNascent | Samples

SRZ1810071 Sample ID 577

**Data sources**
Paper identifier	Danko2015identification
SRP	SRP055129
Samples	SRR1810071
	SRR1810072

**Technical details**
QC score	2
Replicate	1
Protocol	PRO-seq
Library prep	ligation
Spike-in	None
Single/Paired end	single
Timecourse	False
Control/Experimental	control
Outlier	No
Unusable	No

**Downloads**
TDF visualization file	TDF file	157 Mb
Stranded gene read counts	TXT file	1 Mb
Unstranded bidirectional read counts	TXT file	21 Mb
Tfit bidirectional regions	BED file	3 Mb
dREG bidirectional regions	BED file	1 Mb
All data files	ZIP archive

**Cellular details**
Organism	H. sapiens
Sample type	cell line
Cell type	Jurkat T cell
Clone/Individual
Strain
Genotype
Construct

**Conditions and treatments**
Condition type	Treatment	Start time	End time	Duration
vehicle	DMSO/ethanol	-30 min	0 min	30 min

**Extended notes**
Pipeline info and software versions
Sample notes
Analysis notes

**Sample metrics**
Sample QC score	2
Sample NRO score	2
Raw read length	50
Read depth after trimming	58,256,679
Duplication proportion	0.53259
Proportion reads mapped	0.8418
Exon/intron ratio	3.43333
Unique read proportion	0.67072

**Bidirectionals**
Total # Tfit bidirectionals	29921
# Promoter Tfit bidirectionals	11161
# Intronic Tfit bidirectionals	12647
# Intergenic Tfit bidirectionals	6222
Total # dREG bidirectionals	27975
# Promoter dREG bidirectionals	9510
# Intronic dREG bidirectionals	12078
# Intergenic dREG bidirectionals	6361
Part of Tfit master merge?	True
Part of dREG master merge?	True