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SRR3546394,SRR3546395,SRR3546396,...
| Gene read counts | Bidirectional read counts | Tfit regions | dREG regions |
| ZIP archive | ZIP archive | ZIP archive | ZIP archive |
| For TDF visualization files please see individual sample downloads or dataset pages for prebuilt ZIP archives. | |||
| Sample name | Sample ID | Paper identifier | Protocol | Library prep | Control/Experimental | Wildtype & Untreated | QC score | Replicate |
| SRR3546394 | 282 | Boija2017cbp | PRO-seq | ligation | control | False | 4 | 1 |
| SRR3546395 | 283 | Boija2017cbp | PRO-seq | ligation | control | False | 3 | 2 |
| SRR3546396 | 284 | Boija2017cbp | PRO-seq | ligation | experimental | False | 4 | 1 |
| SRR3546397 | 285 | Boija2017cbp | PRO-seq | ligation | experimental | False | 3 | 2 |
| Sample name | Organism | Sample type | Cell type | Clone/Individual | Strain | Genotype | Construct |
| SRR3546394 | D. melanogaster | cell line | S2 | ||||
| SRR3546395 | D. melanogaster | cell line | S2 | ||||
| SRR3546396 | D. melanogaster | cell line | S2 | ||||
| SRR3546397 | D. melanogaster | cell line | S2 |
| Sample name | Condition type | Treatment | Start time | End time | Duration |
| SRR3546394 | treatment | C37 control drug | -10 min | 0 min | 10 min |
| SRR3546395 | treatment | C37 control drug | -10 min | 0 min | 10 min |
| SRR3546396 | treatment | C646 CBP inhibitor (30 microM) | -10 min | 0 min | 10 min |
| SRR3546397 | treatment | C646 CBP inhibitor (30 microM) | -10 min | 0 min | 10 min |
| Sample name | Raw read length | Trim read depth | Duplication proportion | Proportion reads mapped | Exon/intron ratio | Unique read proportion | Sample QC score | Sample NRO score |
| SRR3546394 | 32 | 28,503,775 | 0.80888 | 0.7581 | 3.77511 | 0.2673 | 4 | 2 |
| SRR3546395 | 32 | 26,708,897 | 0.79897 | 0.7472 | 3.11029 | 0.26403 | 3 | 2 |
| SRR3546396 | 32 | 90,871,050 | 0.84159 | 0.7306 | 3.97519 | 0.3381 | 4 | 2 |
| SRR3546397 | 32 | 35,075,833 | 0.76203 | 0.7444 | 3.89874 | 0.33304 | 3 | 2 |
| Sample name | Tfit total bidirs | Tfit promoter bidirs | Tfit intronic bidirs | Tfit intergenic bidirs | dREG total bidirs | dREG promoter bidirs | dREG intronic bidirs | dREG intergenic bidirs |
| SRR3546394 | None | None | None | None | None | None | None | None |
| SRR3546395 | None | None | None | None | None | None | None | None |
| SRR3546396 | None | None | None | None | None | None | None | None |
| SRR3546397 | None | None | None | None | None | None | None | None |
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