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SRR13242137,SRR13242138,SRR13242139,...
| Gene read counts | Bidirectional read counts | Tfit regions | dREG regions |
| ZIP archive | ZIP archive | ZIP archive | ZIP archive |
| For TDF visualization files please see individual sample downloads or dataset pages for prebuilt ZIP archives. | |||
| Sample name | Sample ID | Paper identifier | Protocol | Library prep | Control/Experimental | Wildtype & Untreated | QC score | Replicate |
| SRR13242137 | 466 | Chivu2020unpublished | ChRO-seq | not noted in GEO or publication | control | True | 0 | 1 |
| SRR13242138 | 467 | Chivu2020unpublished | ChRO-seq | not noted in GEO or publication | experimental | False | 0 | 1 |
| SRR13242139 | 468 | Chivu2020unpublished | ChRO-seq | not noted in GEO or publication | experimental | False | 0 | 1 |
| SRR13242380 | 469 | Chivu2020unpublished | ChRO-seq | not noted in GEO or publication | control | True | 5 | 1 |
| SRR13242381 | 470 | Chivu2020unpublished | ChRO-seq | not noted in GEO or publication | control | True | 3 | 2 |
| Sample name | Organism | Sample type | Cell type | Clone/Individual | Strain | Genotype | Construct |
| SRR13242137 | H. sapiens | cell line | K562 | ||||
| SRR13242138 | H. sapiens | cell line | K562 | ||||
| SRR13242139 | H. sapiens | cell line | K562 | ||||
| SRR13242380 | E. caballus | tissue | liver | Wild Guneva Star mare | |||
| SRR13242381 | E. caballus | tissue | liver | Chatty Patty mare |
| Sample name | Condition type | Treatment | Start time | End time | Duration |
| SRR13242137 | no treatment | None | None | None | |
| SRR13242138 | treatment | triptolide (500 nM) | -1 hr | 0 hr | 1 hr |
| SRR13242139 | treatment | triptolide (500 nM) | -4 hr | 0 hr | 4 hr |
| SRR13242380 | no treatment | None | None | None | |
| SRR13242381 | no treatment | None | None | None |
| Sample name | Raw read length | Trim read depth | Duplication proportion | Proportion reads mapped | Exon/intron ratio | Unique read proportion | Sample QC score | Sample NRO score |
| SRR13242137 | 28 | 17,622,931 | None | 0.3089 | 3.77859 | None | 0 | 2 |
| SRR13242138 | 28 | 19,823,798 | None | 0.3359 | 3.09815 | None | 0 | 2 |
| SRR13242139 | 28 | 11,701,820 | None | 0.3004 | 2.29694 | None | 0 | 1 |
| SRR13242380 | 54 | 25,375,127 | 0.97683 | 0.823 | 8.8402 | 0.04943 | 5 | 4 |
| SRR13242381 | 54 | 28,359,892 | 0.77421 | 0.8557 | 8.64527 | 0.4237 | 3 | 4 |
| Sample name | Tfit total bidirs | Tfit promoter bidirs | Tfit intronic bidirs | Tfit intergenic bidirs | dREG total bidirs | dREG promoter bidirs | dREG intronic bidirs | dREG intergenic bidirs |
| SRR13242137 | 17918 | 8808 | 6712 | 2634 | 11072 | 6377 | 3211 | 1511 |
| SRR13242138 | 11870 | 6296 | 4132 | 1119 | 6349 | 3813 | 1692 | 748 |
| SRR13242139 | 1170 | 463 | 372 | 181 | 716 | 185 | 130 | 350 |
| SRR13242380 | None | None | None | None | None | None | None | None |
| SRR13242381 | None | None | None | None | None | None | None | None |
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