SRR8206345
Downloads
Gene read counts Bidirectional read counts Tfit regions dREG regions
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Technical details
Sample name Sample ID Paper identifier Protocol Library prep Control/Experimental Wildtype & Untreated QC score Replicate
SRR8206345 957 Herold2019recruitment GRO-seq ligation experimental False 4 1
Cellular details
Sample name Organism Sample type Cell type Clone/Individual Strain Genotype Construct
SRR8206345 H. sapiens cell line SHEP shRNA Brca1 (stable)
Conditions
Sample name Condition type Treatment Start time End time Duration
SRR8206345 treatment various None None None
Sample metrics
Sample name Raw read length Trim read depth Duplication proportion Proportion reads mapped Exon/intron ratio Unique read proportion Sample QC score Sample NRO score
SRR8206345 50 152,062,827 0.87767 0.8542 5.80022 0.16323 4 3
Bidirectionals
Sample name Tfit total bidirs Tfit promoter bidirs Tfit intronic bidirs Tfit intergenic bidirs dREG total bidirs dREG promoter bidirs dREG intronic bidirs dREG intergenic bidirs
SRR8206345 21406 6597 10155 3055 17635 6523 7583 2946
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