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SRR8206345
Gene read counts | Bidirectional read counts | Tfit regions | dREG regions |
ZIP archive | ZIP archive | ZIP archive | ZIP archive |
For TDF visualization files please see individual sample downloads or dataset pages for prebuilt ZIP archives. |
Sample name | Sample ID | Paper identifier | Protocol | Library prep | Control/Experimental | Wildtype & Untreated | QC score | Replicate |
SRR8206345 | 957 | Herold2019recruitment | GRO-seq | ligation | experimental | False | 4 | 1 |
Sample name | Organism | Sample type | Cell type | Clone/Individual | Strain | Genotype | Construct |
SRR8206345 | H. sapiens | cell line | SHEP | shRNA Brca1 (stable) |
Sample name | Condition type | Treatment | Start time | End time | Duration |
SRR8206345 | treatment | various | None | None | None |
Sample name | Raw read length | Trim read depth | Duplication proportion | Proportion reads mapped | Exon/intron ratio | Unique read proportion | Sample QC score | Sample NRO score |
SRR8206345 | 50 | 152,062,827 | 0.87767 | 0.8542 | 5.80022 | 0.16323 | 4 | 3 |
Sample name | Tfit total bidirs | Tfit promoter bidirs | Tfit intronic bidirs | Tfit intergenic bidirs | dREG total bidirs | dREG promoter bidirs | dREG intronic bidirs | dREG intergenic bidirs |
SRR8206345 | 21406 | 6597 | 10155 | 3055 | 17635 | 6523 | 7583 | 2946 |