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SRR3555068,SRR3555069
| Gene read counts | Bidirectional read counts | Tfit regions | dREG regions |
| ZIP archive | ZIP archive | ZIP archive | ZIP archive |
| For TDF visualization files please see individual sample downloads or dataset pages for prebuilt ZIP archives. | |||
| Sample name | Sample ID | Paper identifier | Protocol | Library prep | Control/Experimental | Wildtype & Untreated | QC score | Replicate |
| SRR3555068 | 1207 | Kim2018pluripotency | PRO-cap | ligation | control | True | 4 | 1 |
| SRR3555069 | 1208 | Kim2018pluripotency | PRO-cap | ligation | control | True | 5 | 1 |
| Sample name | Organism | Sample type | Cell type | Clone/Individual | Strain | Genotype | Construct |
| SRR3555068 | M. musculus | cell line | ESC | ||||
| SRR3555069 | M. musculus | primary cell | peritoneal macrophage |
| Sample name | Condition type | Treatment | Start time | End time | Duration |
| SRR3555068 | no treatment | None | None | None | |
| SRR3555069 | no treatment | None | None | None |
| Sample name | Raw read length | Trim read depth | Duplication proportion | Proportion reads mapped | Exon/intron ratio | Unique read proportion | Sample QC score | Sample NRO score |
| SRR3555068 | 51 | 31,661,925 | 0.83659 | 0.2313 | 5.58108 | 0.14544 | 4 | 3 |
| SRR3555069 | 51 | 16,356,331 | 0.90975 | 0.2382 | 6.36434 | 0.06168 | 5 | 3 |
| Sample name | Tfit total bidirs | Tfit promoter bidirs | Tfit intronic bidirs | Tfit intergenic bidirs | dREG total bidirs | dREG promoter bidirs | dREG intronic bidirs | dREG intergenic bidirs |
| SRR3555068 | 9528 | 3596 | 2521 | 2462 | 8738 | 5443 | 1577 | 1271 |
| SRR3555069 | 2875 | 1438 | 759 | 219 | 2280 | 1730 | 303 | 78 |
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