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SRR5382455,SRR5382456,SRR5382457,...
| Gene read counts | Bidirectional read counts | Tfit regions | dREG regions |
| ZIP archive | ZIP archive | ZIP archive | ZIP archive |
| For TDF visualization files please see individual sample downloads or dataset pages for prebuilt ZIP archives. | |||
| Sample name | Sample ID | Paper identifier | Protocol | Library prep | Control/Experimental | Wildtype & Untreated | QC score | Replicate |
| SRR5382455 | 1636 | Liu2017identification | PRO-seq | ligation | control | True | 5 | 1 |
| SRR5382456 | 1637 | Liu2017identification | PRO-seq | ligation | control | True | 2 | 1 |
| SRR5382457 | 1638 | Liu2017identification | PRO-seq | ligation | control | True | 2 | 2 |
| SRR5382458 | 1639 | Liu2017identification | PRO-seq | ligation | control | True | 1 | 3 |
| SRR5382459 | 1640 | Liu2017identification | PRO-seq | ligation | control | True | 1 | 4 |
| SRR5382460 | 1641 | Liu2017identification | PRO-seq | ligation | control | True | 1 | 5 |
| SRR5382461 | 1642 | Liu2017identification | PRO-seq | ligation | control | True | 1 | 6 |
| SRR5382462 | 1643 | Liu2017identification | PRO-seq | ligation | control | True | 2 | 1 |
| SRR5382463 | 1644 | Liu2017identification | PRO-seq | ligation | control | True | 2 | 2 |
| SRR5382464 | 1645 | Liu2017identification | PRO-seq | ligation | control | True | 2 | 3 |
| SRR5382465 | 1646 | Liu2017identification | PRO-seq | ligation | control | True | 4 | 1 |
| SRR5382466 | 1647 | Liu2017identification | PRO-seq | ligation | control | True | 4 | 2 |
| SRR5382467 | 1648 | Liu2017identification | PRO-seq | ligation | control | True | 4 | 1 |
| SRR5382468 | 1649 | Liu2017identification | PRO-seq | ligation | control | True | 5 | 2 |
| Sample name | Organism | Sample type | Cell type | Clone/Individual | Strain | Genotype | Construct |
| SRR5382455 | H. sapiens | cell line | Daudi | ||||
| SRR5382456 | H. sapiens | cell line | Kasumi-1 | ||||
| SRR5382457 | H. sapiens | cell line | Kasumi-1 | ||||
| SRR5382458 | H. sapiens | cell line | Kasumi-1 | ||||
| SRR5382459 | H. sapiens | cell line | Kasumi-1 | ||||
| SRR5382460 | H. sapiens | cell line | Kasumi-1 | ||||
| SRR5382461 | H. sapiens | cell line | Kasumi-1 | ||||
| SRR5382462 | H. sapiens | cell line | OCI-LY1 | ||||
| SRR5382463 | H. sapiens | cell line | OCI-LY1 | ||||
| SRR5382464 | H. sapiens | cell line | OCI-LY1 | ||||
| SRR5382465 | H. sapiens | cell line | MV4-11 | ||||
| SRR5382466 | H. sapiens | cell line | MV4-11 | ||||
| SRR5382467 | H. sapiens | cell line | U936 | ||||
| SRR5382468 | H. sapiens | cell line | U936 |
| Sample name | Condition type | Treatment | Start time | End time | Duration |
| SRR5382455 | no treatment | None | None | None | |
| SRR5382456 | no treatment | None | None | None | |
| SRR5382457 | no treatment | None | None | None | |
| SRR5382458 | no treatment | None | None | None | |
| SRR5382459 | no treatment | None | None | None | |
| SRR5382460 | no treatment | None | None | None | |
| SRR5382461 | no treatment | None | None | None | |
| SRR5382462 | no treatment | None | None | None | |
| SRR5382463 | no treatment | None | None | None | |
| SRR5382464 | no treatment | None | None | None | |
| SRR5382465 | no treatment | None | None | None | |
| SRR5382466 | no treatment | None | None | None | |
| SRR5382467 | no treatment | None | None | None | |
| SRR5382468 | no treatment | None | None | None |
| Sample name | Raw read length | Trim read depth | Duplication proportion | Proportion reads mapped | Exon/intron ratio | Unique read proportion | Sample QC score | Sample NRO score |
| SRR5382455 | 51 | 27,669,667 | 0.96405 | 0.0746 | 5.58537 | 0.01161 | 5 | 3 |
| SRR5382456 | 51 | 33,137,437 | 0.50482 | 0.76 | 3.72321 | 0.58338 | 2 | 2 |
| SRR5382457 | 51 | 37,117,961 | 0.50383 | 0.7475 | 3.77812 | 0.59338 | 2 | 2 |
| SRR5382458 | 51 | 36,368,321 | 0.38438 | 0.7252 | 3.92127 | 0.69095 | 1 | 2 |
| SRR5382459 | 51 | 36,459,149 | 0.38969 | 0.717 | 3.84369 | 0.68723 | 1 | 2 |
| SRR5382460 | 51 | 37,596,503 | 0.39016 | 0.7078 | 4.30754 | 0.693 | 1 | 2 |
| SRR5382461 | 51 | 32,821,860 | 0.36401 | 0.6968 | 4.18743 | 0.70554 | 1 | 2 |
| SRR5382462 | 51 | 51,646,482 | 0.55578 | 0.8317 | 3.36509 | 0.62901 | 2 | 2 |
| SRR5382463 | 51 | 41,897,356 | 0.50595 | 0.8377 | 3.37579 | 0.64398 | 2 | 2 |
| SRR5382464 | 51 | 44,516,585 | 0.5413 | 0.8273 | 3.37241 | 0.62414 | 2 | 2 |
| SRR5382465 | 75 | 14,786,830 | 0.80868 | 0.7767 | 4.76817 | 0.21272 | 4 | 2 |
| SRR5382466 | 75 | 27,223,231 | 0.88046 | 0.8101 | 4.53608 | 0.21412 | 4 | 2 |
| SRR5382467 | 51 | 10,749,582 | 0.46875 | 0.6156 | 3.60891 | 0.49601 | 4 | 2 |
| SRR5382468 | 51 | 7,404,020 | 0.37455 | 0.5362 | 3.25954 | 0.54114 | 5 | 2 |
| Sample name | Tfit total bidirs | Tfit promoter bidirs | Tfit intronic bidirs | Tfit intergenic bidirs | dREG total bidirs | dREG promoter bidirs | dREG intronic bidirs | dREG intergenic bidirs |
| SRR5382455 | None | None | None | None | None | None | None | None |
| SRR5382456 | None | None | None | None | None | None | None | None |
| SRR5382457 | None | None | None | None | None | None | None | None |
| SRR5382458 | None | None | None | None | None | None | None | None |
| SRR5382459 | None | None | None | None | None | None | None | None |
| SRR5382460 | None | None | None | None | None | None | None | None |
| SRR5382461 | None | None | None | None | None | None | None | None |
| SRR5382462 | None | None | None | None | None | None | None | None |
| SRR5382463 | None | None | None | None | None | None | None | None |
| SRR5382464 | None | None | None | None | None | None | None | None |
| SRR5382465 | None | None | None | None | None | None | None | None |
| SRR5382466 | None | None | None | None | None | None | None | None |
| SRR5382467 | None | None | None | None | None | None | None | None |
| SRR5382468 | None | None | None | None | None | None | None | None |
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