SRR7195585,SRR7195584
Downloads
Gene read counts Bidirectional read counts Tfit regions dREG regions
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For TDF visualization files please see individual sample downloads or dataset pages for prebuilt ZIP archives.
Technical details
Sample name Sample ID Paper identifier Protocol Library prep Control/Experimental Wildtype & Untreated QC score Replicate
SRR7195585 1730 Lozano2018rna PRO-seq ligation control True 2 1
SRR7195584 1729 Lozano2018rna PRO-seq ligation control True 3 1
Cellular details
Sample name Organism Sample type Cell type Clone/Individual Strain Genotype Construct
SRR7195585 Z. mays tissue shoot B73
SRR7195584 M. esculenta tissue shoot Nase 3
Conditions
Sample name Condition type Treatment Start time End time Duration
SRR7195585 no treatment None None None
SRR7195584 no treatment None None None
Sample metrics
Sample name Raw read length Trim read depth Duplication proportion Proportion reads mapped Exon/intron ratio Unique read proportion Sample QC score Sample NRO score
SRR7195585 76 15,631,331 0.63636 0.9254 1.60483 0.39531 2 1
SRR7195584 101 84,474,815 0.6884 0.6704 2.96227 0.45165 3 1
Bidirectionals
Sample name Tfit total bidirs Tfit promoter bidirs Tfit intronic bidirs Tfit intergenic bidirs dREG total bidirs dREG promoter bidirs dREG intronic bidirs dREG intergenic bidirs
SRR7195585 None None None None None None None None
SRR7195584 None None None None None None None None
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