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SRR7195585,SRR7195584
Gene read counts | Bidirectional read counts | Tfit regions | dREG regions |
ZIP archive | ZIP archive | ZIP archive | ZIP archive |
For TDF visualization files please see individual sample downloads or dataset pages for prebuilt ZIP archives. |
Sample name | Sample ID | Paper identifier | Protocol | Library prep | Control/Experimental | Wildtype & Untreated | QC score | Replicate |
SRR7195585 | 1730 | Lozano2018rna | PRO-seq | ligation | control | True | 2 | 1 |
SRR7195584 | 1729 | Lozano2018rna | PRO-seq | ligation | control | True | 3 | 1 |
Sample name | Organism | Sample type | Cell type | Clone/Individual | Strain | Genotype | Construct |
SRR7195585 | Z. mays | tissue | shoot | B73 | |||
SRR7195584 | M. esculenta | tissue | shoot | Nase 3 |
Sample name | Condition type | Treatment | Start time | End time | Duration |
SRR7195585 | no treatment | None | None | None | |
SRR7195584 | no treatment | None | None | None |
Sample name | Raw read length | Trim read depth | Duplication proportion | Proportion reads mapped | Exon/intron ratio | Unique read proportion | Sample QC score | Sample NRO score |
SRR7195585 | 76 | 15,631,331 | 0.63636 | 0.9254 | 1.60483 | 0.39531 | 2 | 1 |
SRR7195584 | 101 | 84,474,815 | 0.6884 | 0.6704 | 2.96227 | 0.45165 | 3 | 1 |
Sample name | Tfit total bidirs | Tfit promoter bidirs | Tfit intronic bidirs | Tfit intergenic bidirs | dREG total bidirs | dREG promoter bidirs | dREG intronic bidirs | dREG intergenic bidirs |
SRR7195585 | None | None | None | None | None | None | None | None |
SRR7195584 | None | None | None | None | None | None | None | None |