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SRR646576,SRR646577,SRR646578,...
| Gene read counts | Bidirectional read counts | Tfit regions | dREG regions |
| ZIP archive | ZIP archive | ZIP archive | ZIP archive |
| For TDF visualization files please see individual sample downloads or dataset pages for prebuilt ZIP archives. | |||
| Sample name | Sample ID | Paper identifier | Protocol | Library prep | Control/Experimental | Wildtype & Untreated | QC score | Replicate |
| SRR646576 | 2127 | Rozhkov2013multiple | GRO-seq | ligation | control | False | 3 | 1 |
| SRR646577 | 2128 | Rozhkov2013multiple | GRO-seq | ligation | experimental | False | 3 | 1 |
| SRR646578 | 2129 | Rozhkov2013multiple | GRO-seq | ligation | control | False | 3 | 1 |
| SRR646579 | 2130 | Rozhkov2013multiple | GRO-seq | ligation | experimental | False | 3 | 1 |
| Sample name | Organism | Sample type | Cell type | Clone/Individual | Strain | Genotype | Construct |
| SRR646576 | D. melanogaster | tissue | ovary | traffic jam promoter Gal4-responsive dsRNA white | |||
| SRR646577 | D. melanogaster | tissue | ovary | traffic jam promoter Gal4-responsive dsRNA piwi | |||
| SRR646578 | D. melanogaster | tissue | ovary | nanos promoter Gal4-responsive dsRNA white; Dcr2 constitutive knock-in | |||
| SRR646579 | D. melanogaster | tissue | ovary | nanos promoter Gal4-responsive dsRNA piwi; Dcr2 constitutive knock-in |
| Sample name | Condition type | Treatment | Start time | End time | Duration |
| SRR646576 | no treatment | None | None | None | |
| SRR646577 | no treatment | None | None | None | |
| SRR646578 | no treatment | None | None | None | |
| SRR646579 | no treatment | None | None | None |
| Sample name | Raw read length | Trim read depth | Duplication proportion | Proportion reads mapped | Exon/intron ratio | Unique read proportion | Sample QC score | Sample NRO score |
| SRR646576 | 50 | 16,394,949 | 0.69814 | 0.6751 | 2.02435 | 0.31516 | 3 | 1 |
| SRR646577 | 50 | 17,848,529 | 0.68763 | 0.6714 | 1.93805 | 0.33579 | 3 | 1 |
| SRR646578 | 50 | 15,531,408 | 0.70333 | 0.6263 | 1.97519 | 0.29848 | 3 | 1 |
| SRR646579 | 50 | 14,908,814 | 0.69197 | 0.6327 | 1.57674 | 0.30628 | 3 | 1 |
| Sample name | Tfit total bidirs | Tfit promoter bidirs | Tfit intronic bidirs | Tfit intergenic bidirs | dREG total bidirs | dREG promoter bidirs | dREG intronic bidirs | dREG intergenic bidirs |
| SRR646576 | None | None | None | None | None | None | None | None |
| SRR646577 | None | None | None | None | None | None | None | None |
| SRR646578 | None | None | None | None | None | None | None | None |
| SRR646579 | None | None | None | None | None | None | None | None |
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