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SRR10673649,SRR10673650,SRR10673651,...
| Gene read counts | Bidirectional read counts | Tfit regions | dREG regions |
| ZIP archive | ZIP archive | ZIP archive | ZIP archive |
| For TDF visualization files please see individual sample downloads or dataset pages for prebuilt ZIP archives. | |||
| Sample name | Sample ID | Paper identifier | Protocol | Library prep | Control/Experimental | Wildtype & Untreated | QC score | Replicate |
| SRR10673649 | 2514 | Vaid2020release | PRO-seq | ligation | control | True | 3 | 1 |
| SRR10673650 | 2515 | Vaid2020release | PRO-seq | ligation | control | True | 3 | 2 |
| SRR10673651 | 2516 | Vaid2020release | PRO-seq | ligation | experimental | False | 3 | 1 |
| SRR10673652 | 2517 | Vaid2020release | PRO-seq | ligation | experimental | False | 3 | 2 |
| SRR10673653 | 2518 | Vaid2020release | PRO-seq | ligation | experimental | False | 3 | 1 |
| SRR10673654 | 2519 | Vaid2020release | PRO-seq | ligation | experimental | False | 3 | 2 |
| Sample name | Organism | Sample type | Cell type | Clone/Individual | Strain | Genotype | Construct |
| SRR10673649 | D. melanogaster | cell line | S2 | ||||
| SRR10673650 | D. melanogaster | cell line | S2 | ||||
| SRR10673651 | D. melanogaster | cell line | S2 | ||||
| SRR10673652 | D. melanogaster | cell line | S2 | ||||
| SRR10673653 | D. melanogaster | cell line | S2 | ||||
| SRR10673654 | D. melanogaster | cell line | S2 |
| Sample name | Condition type | Treatment | Start time | End time | Duration |
| SRR10673649 | vehicle | DMSO | None | None | None |
| SRR10673650 | vehicle | DMSO | None | None | None |
| SRR10673651 | treatment | trichostatin A (400 nM) | -10 min | 0 min | 10 min |
| SRR10673652 | treatment | trichostatin A (400 nM) | -10 min | 0 min | 10 min |
| SRR10673653 | treatment | trichostatin A (400 nM) | -30 min | 0 min | 30 min |
| SRR10673654 | treatment | trichostatin A (400 nM) | -30 min | 0 min | 30 min |
| Sample name | Raw read length | Trim read depth | Duplication proportion | Proportion reads mapped | Exon/intron ratio | Unique read proportion | Sample QC score | Sample NRO score |
| SRR10673649 | 75 | 21,117,688 | 0.74715 | 0.7991 | 1.59212 | 0.28098 | 3 | 1 |
| SRR10673650 | 75 | 16,589,585 | 0.70527 | 0.7981 | 2.43411 | 0.31489 | 3 | 1 |
| SRR10673651 | 75 | 19,191,327 | 0.70657 | 0.8006 | 1.96378 | 0.32299 | 3 | 1 |
| SRR10673652 | 75 | 11,815,601 | 0.66533 | 0.8062 | 2.32377 | 0.32998 | 3 | 1 |
| SRR10673653 | 75 | 19,902,744 | 0.73356 | 0.7884 | 2.39358 | 0.31017 | 3 | 1 |
| SRR10673654 | 75 | 15,962,126 | 0.74325 | 0.7697 | 2.8024 | 0.28362 | 3 | 1 |
| Sample name | Tfit total bidirs | Tfit promoter bidirs | Tfit intronic bidirs | Tfit intergenic bidirs | dREG total bidirs | dREG promoter bidirs | dREG intronic bidirs | dREG intergenic bidirs |
| SRR10673649 | None | None | None | None | None | None | None | None |
| SRR10673650 | None | None | None | None | None | None | None | None |
| SRR10673651 | None | None | None | None | None | None | None | None |
| SRR10673652 | None | None | None | None | None | None | None | None |
| SRR10673653 | None | None | None | None | None | None | None | None |
| SRR10673654 | None | None | None | None | None | None | None | None |
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