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SRZ10466082,SRZ10466084
Gene read counts | Bidirectional read counts | Tfit regions | dREG regions |
ZIP archive | ZIP archive | ZIP archive | ZIP archive |
For TDF visualization files please see individual sample downloads or dataset pages for prebuilt ZIP archives. |
Sample name | Sample ID | Paper identifier | Protocol | Library prep | Control/Experimental | Wildtype & Untreated | QC score | Replicate |
SRZ10466082 | 2632 | Wang2020increased | GRO-seq | ligation | control | True | 1 | 1 |
SRZ10466084 | 2633 | Wang2020increased | GRO-seq | ligation | control | True | 1 | 2 |
Sample name | Organism | Sample type | Cell type | Clone/Individual | Strain | Genotype | Construct |
SRZ10466082 | H. sapiens | primary cell | NSPC | ||||
SRZ10466084 | H. sapiens | primary cell | NSPC |
Sample name | Condition type | Treatment | Start time | End time | Duration |
SRZ10466082 | no treatment | None | None | None | |
SRZ10466084 | no treatment | None | None | None |
Sample name | Raw read length | Trim read depth | Duplication proportion | Proportion reads mapped | Exon/intron ratio | Unique read proportion | Sample QC score | Sample NRO score |
SRZ10466082 | 50 | 55,415,734 | 0.48856 | 0.9157 | 1.99256 | 0.77848 | 1 | 1 |
SRZ10466084 | 50 | 52,956,511 | 0.46279 | 0.9286 | 2.07419 | 0.79444 | 1 | 1 |
Sample name | Tfit total bidirs | Tfit promoter bidirs | Tfit intronic bidirs | Tfit intergenic bidirs | dREG total bidirs | dREG promoter bidirs | dREG intronic bidirs | dREG intergenic bidirs |
SRZ10466082 | 48332 | 12507 | 21461 | 12476 | 34314 | 8085 | 14743 | 10129 |
SRZ10466084 | 48681 | 12613 | 21444 | 12661 | 34451 | 8181 | 14785 | 10171 |