SRZ10466082,SRZ10466084
Downloads
Gene read counts Bidirectional read counts Tfit regions dREG regions
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For TDF visualization files please see individual sample downloads or dataset pages for prebuilt ZIP archives.
Technical details
Sample name Sample ID Paper identifier Protocol Library prep Control/Experimental Wildtype & Untreated QC score Replicate
SRZ10466082 2632 Wang2020increased GRO-seq ligation control True 1 1
SRZ10466084 2633 Wang2020increased GRO-seq ligation control True 1 2
Cellular details
Sample name Organism Sample type Cell type Clone/Individual Strain Genotype Construct
SRZ10466082 H. sapiens primary cell NSPC
SRZ10466084 H. sapiens primary cell NSPC
Conditions
Sample name Condition type Treatment Start time End time Duration
SRZ10466082 no treatment None None None
SRZ10466084 no treatment None None None
Sample metrics
Sample name Raw read length Trim read depth Duplication proportion Proportion reads mapped Exon/intron ratio Unique read proportion Sample QC score Sample NRO score
SRZ10466082 50 55,415,734 0.48856 0.9157 1.99256 0.77848 1 1
SRZ10466084 50 52,956,511 0.46279 0.9286 2.07419 0.79444 1 1
Bidirectionals
Sample name Tfit total bidirs Tfit promoter bidirs Tfit intronic bidirs Tfit intergenic bidirs dREG total bidirs dREG promoter bidirs dREG intronic bidirs dREG intergenic bidirs
SRZ10466082 48332 12507 21461 12476 34314 8085 14743 10129
SRZ10466084 48681 12613 21444 12661 34451 8181 14785 10171
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