Herold2019recruitment
Samples in dataset (Table view)
SRR8206345
Downloads (all samples in dataset)
TDFs (visualization files) Zip archive 97 Mb
Read counts and bidirectional calls Zip archive 8 Mb
Paper Details
SRP accession SRP135799
GEO accession GSE111905
Protocol GRO-seq
Organisms H. sapiens
Library Prep ligation
Spike-in
Published Yes
Year 2019
First Author Herold
Last Author Eilers
DOI 10.1038/s41586-019-1030-9
Full citation Steffi Herold, Jacqueline Kalb, Gabriele Buchel, Carsten P. Ade, Apoorva Baluapuri, Jiajia Xu, Jan Koster, Daniel Solvie, Anne Carstensen, Christina Klotz, Sabrina Rodewald, Christina Schulein-Volk, Matthias Dobbelstein, Elmar Wolf, Jan Molenaar, Rogier Versteeg, Susanne Walz, and Martin Eilers. Recruitment of BRCA1 limits MYCN-driven accumulation of stalled RNA polymerase. Nature, 567(7749):545-549, 2019.
Median QC score
Information
4.0
ATAC-seq? No
RNA-seq? Yes
ChIP-seq? Yes
3D Seq? No
Other Seq? Yes