Kim2018pluripotency
Downloads (all samples in dataset)
All metadata TXT 3 Kb
TDFs (visualization files) ZIP archive 29 Mb
Read counts and bidirectional calls ZIP archive 12 Mb
Paper Details
SRP accession SRP075469
GEO accession GSE81677
Protocol PRO-cap
Organisms M. musculus
Library Prep ligation
Spike-in
Published Yes
Year 2018
First Author Kim
Last Author Rosenfeld
DOI 10.1038/s41586-018-0048-8
Full citation Hong Sook Kim, Yuliang Tan, Wubin Ma, Daria Merkurjev, Eugin Destici, Qi Ma, Tom Suter, Kenneth Ohgi, Meyer Friedman, Dorota Skowronska-Krawczyk, and Michael G. Rosenfeld. Pluripotency factors functionally premark cell-type-restricted enhancers in ES cells. Nature, 556(7702):510-514, Apr 2018.
Median QC score
Information
4.5
ATAC-seq? Yes
RNA-seq? Yes
ChIP-seq? Yes
3D Seq? No
Other Seq? Yes