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Sample Pipeline Info
SRR5227985
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| Run 1 | Run 2 | |
| nascentflow_version | 1.3 | |
| downfile_version | 1.0 | |
| pipeline_revision_hash | 190d9b4655 | |
| pipeline_hash | 9cf6932fd8e62aa37ae5b60c80c6dad7 | |
| nascentflow_date | Feb. 22, 2021 | None |
| nascentflow_redo_date | None | None |
| downfile_pipeline_date | None | May 31, 2022 |
| nextflow_version | 20.07.1 | 20.07.1 |
| fastqc_version | 0.11.8 | |
| bbmap_version | 38.05 | |
| hisat2_version | 2.1.0 | |
| samtools_version | 1.8 | 1.8 |
| sratools_version | 2.9.2 | |
| preseq_version | 2.0.3 | |
| preseq_date | Feb. 22, 2021 | None |
| rseqc_version | 3.0.0 | |
| rseqc_date | Feb. 22, 2021 | None |
| java_version | 1.8.0 | 1.8.0_292 |
| picard_gc_version | 2.6.0 | |
| picard_dups_version | 2.6.0 | |
| picard_date | Feb. 22, 2021 | None |
| bedtools_version | 2.25.0 | 2.28.0 |
| igvtools_version | 2.3.75 | 2.3.75 |
| seqkit_version | 0.9.0 | |
| mpich_version | 3.2.1 | |
| gcc_version | 7.1.0 | 4.8.5-44) |
| python_version | 3.6.3 | 3.6.3 |
| numpy_version | 1.14.1 |
| Run 1 | Run 2 | Run 3 | Run 4 | Run 5 | Run 6 | Run 7 | Run 8 | Run 9 | |
| bidirflow_version | |||||||||
| pipeline_revision_hash | |||||||||
| pipeline_hash | d331a71c395cd11a8a63403df318f146 | b296d5b5a3a80b1bf123c5be2a7cafdb | 9524b53afbf6cd817935585d3cfdf406 | 4557d2a6c198c27025fd9670748f49bb | 18a683a01fd6c310e331f9fb53d2a929 | 18a683a01fd6c310e331f9fb53d2a929 | d2d911d82fcd45db628e998dc9ebc88f | d2d911d82fcd45db628e998dc9ebc88f | 0dead05b4074c2dae176897e3ab8116c |
| bidirflow_date | None | None | None | None | None | None | None | None | None |
| nextflow_version | 20.07.1 | 20.07.1 | 20.07.1 | 20.07.1 | 20.07.1 | 20.07.1 | 20.07.1 | 20.07.1 | 20.07.1 |
| samtools_version | 1.8 | 1.8 | 1.8 | 1.8 | 1.8 | 1.8 | 1.8 | 1.8 | 1.8 |
| bedtools_version | 2.28.0 | 2.28.0 | 2.28.0 | 2.28.0 | 2.28.0 | 2.28.0 | 2.28.0 | 2.28.0 | 2.28.0 |
| mpich_version | 3.2 | ||||||||
| openmpi_version | 1.6.4 | 1.6.4 | 1.6.4 | 1.6.4 | 1.6.4 | 1.6.4 | 1.6.4 | 1.6.4 | 1.6.4 |
| gcc_version | 7.1.0 | 7.1.0 | 7.1.0 | 7.1.0 | 7.1.0 | 7.1.0 | 7.1.0 | 7.1.0 | 7.1.0 |
| r_version | 3.6.1 | 3.6.1 | 3.6.1 | 3.6.1 | 3.6.1 | 3.6.1 | 3.6.1 | 3.6.1 | 3.6.1 |
| rsubread_version | 2.0.1 | 2.0.1 | 2.0.1 | 2.0.1 | 2.0.1 | 2.0.1 | 2.0.1 | 2.0.1 | 2.12.3 |
| boost_version | 1.75.0 | ||||||||
| fstitch_version | 1.1 | 1.1 | 1.1 | 1.1 | 1.1 | 1.1 | 1.1 | 1.1 | 1.1 |
| tfit_version | Unknown | 1.2 | 1.2 | 1.2 | 1.2 | 1.2 | 1.2 | 1.2 | 1.2 |
| dreg_version | 1.4.0 | 1.4.0 | 1.4.0 | 1.4.0 | 1.4.0 | 1.4.0 | 1.4.0 | 1.4.0 | 1.4.0 |
| dreg_date | None | Nov. 20, 2021 | None | None | None | None | March 14, 2023 | March 14, 2023 | None |
| dreg_postprocess_date | None | None | None | April 14, 2022 | None | None | March 14, 2023 | March 14, 2023 | None |
| tfit_date | None | None | Dec. 28, 2021 | None | None | None | March 14, 2023 | March 14, 2023 | None |
| tfit_prelim_date | Oct. 5, 2021 | None | None | None | None | None | March 14, 2023 | March 14, 2023 | None |
| fcgene_date | None | None | None | None | July 4, 2022 | None | March 14, 2023 | None | March 29, 2023 |
| fcbidir_date | None | None | None | None | July 4, 2022 | July 4, 2022 | None | None | March 29, 2023 |