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SRR5466770
Gene read counts | Bidirectional read counts | Tfit regions | dREG regions |
ZIP archive | ZIP archive | ZIP archive | ZIP archive |
For TDF visualization files please see individual sample downloads or dataset pages for prebuilt ZIP archives. |
Sample name | Sample ID | Paper identifier | Protocol | Library prep | Control/Experimental | Wildtype & Untreated | QC score | Replicate |
SRR5466770 | 604 | Dorighi2017mll3 | GRO-seq | ligation | control | True | 4 | 1 |
Sample name | Organism | Sample type | Cell type | Clone/Individual | Strain | Genotype | Construct |
SRR5466770 | M. musculus | cell line | ESC | R1 | 129S1/SvImJ x 129X1/SvJ |
Sample name | Condition type | Treatment | Start time | End time | Duration |
SRR5466770 | no treatment | None | None | None |
Sample name | Raw read length | Trim read depth | Duplication proportion | Proportion reads mapped | Exon/intron ratio | Unique read proportion | Sample QC score | Sample NRO score |
SRR5466770 | 51 | 146,752,727 | 0.91738 | 0.7023 | 2.96903 | 0.35267 | 4 | 1 |
Sample name | Tfit total bidirs | Tfit promoter bidirs | Tfit intronic bidirs | Tfit intergenic bidirs | dREG total bidirs | dREG promoter bidirs | dREG intronic bidirs | dREG intergenic bidirs |
SRR5466770 | 31542 | 6812 | 10734 | 11336 | 30349 | 7723 | 8688 | 12022 |