SRR5466770
Downloads
Gene read counts Bidirectional read counts Tfit regions dREG regions
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Technical details
Sample name Sample ID Paper identifier Protocol Library prep Control/Experimental Wildtype & Untreated QC score Replicate
SRR5466770 604 Dorighi2017mll3 GRO-seq ligation control True 4 1
Cellular details
Sample name Organism Sample type Cell type Clone/Individual Strain Genotype Construct
SRR5466770 M. musculus cell line ESC R1 129S1/SvImJ x 129X1/SvJ
Conditions
Sample name Condition type Treatment Start time End time Duration
SRR5466770 no treatment None None None
Sample metrics
Sample name Raw read length Trim read depth Duplication proportion Proportion reads mapped Exon/intron ratio Unique read proportion Sample QC score Sample NRO score
SRR5466770 51 146,752,727 0.91738 0.7023 2.96903 0.35267 4 1
Bidirectionals
Sample name Tfit total bidirs Tfit promoter bidirs Tfit intronic bidirs Tfit intergenic bidirs dREG total bidirs dREG promoter bidirs dREG intronic bidirs dREG intergenic bidirs
SRR5466770 31542 6812 10734 11336 30349 7723 8688 12022
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