SRZ5944950,SRZ5944951
Downloads
Gene read counts Bidirectional read counts Tfit regions dREG regions
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For TDF visualization files please see individual sample downloads or dataset pages for prebuilt ZIP archives.
Technical details
Sample name Sample ID Paper identifier Protocol Library prep Control/Experimental Wildtype & Untreated QC score Replicate
SRZ5944950 880 Gao2017thyroid GRO-seq circularization control True 4 1
SRZ5944951 881 Gao2017thyroid GRO-seq circularization experimental False 4 2
Cellular details
Sample name Organism Sample type Cell type Clone/Individual Strain Genotype Construct
SRZ5944950 H. sapiens primary cell CD34+ erythroblast
SRZ5944951 H. sapiens primary cell CD34+ erythroblast
Conditions
Sample name Condition type Treatment Start time End time Duration
SRZ5944950 vehicle DMSO -6 hr 0 hr 6 hr
SRZ5944951 treatment GC-1 (1 M) -6 hr 0 hr 6 hr
Sample metrics
Sample name Raw read length Trim read depth Duplication proportion Proportion reads mapped Exon/intron ratio Unique read proportion Sample QC score Sample NRO score
SRZ5944950 50 73,409,312 0.86163 0.8293 3.64671 0.17701 4 2
SRZ5944951 50 50,590,167 0.91235 0.7686 3.49655 0.11784 4 2
Bidirectionals
Sample name Tfit total bidirs Tfit promoter bidirs Tfit intronic bidirs Tfit intergenic bidirs dREG total bidirs dREG promoter bidirs dREG intronic bidirs dREG intergenic bidirs
SRZ5944950 7578 3780 2769 301 5535 3212 1703 767
SRZ5944951 4600 2343 1632 167 2714 1701 800 373
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