DBNascent | Samples

SRR3647033,SRR3647034,SRR3647035

**Downloads**
Gene read counts	Bidirectional read counts	Tfit regions	dREG regions
ZIP archive	ZIP archive	ZIP archive	ZIP archive
For TDF visualization files please see individual sample downloads or dataset pages for prebuilt ZIP archives.

**Technical details**
Sample name	Sample ID	Paper identifier	Protocol	Library prep	Control/Experimental	Wildtype & Untreated	QC score	Replicate
SRR3647033	958	Hetzel2016nascent	GRO-cap	ligation	control	True	3	1
SRR3647034	959	Hetzel2016nascent	GRO-seq	ligation	control	True	4	1
SRR3647035	960	Hetzel2016nascent	GRO-seq	ligation	control	True	3	2

**Cellular details**
Sample name	Organism	Sample type	Cell type	Clone/Individual	Strain	Genotype	Construct
SRR3647033	A. thaliana	tissue	seed		Col-0
SRR3647034	A. thaliana	tissue	seed		Col-0
SRR3647035	A. thaliana	tissue	seed		Col-0

**Conditions**
Sample name	Condition type	Treatment	Start time	End time	Duration
SRR3647033	no treatment		None	None	None
SRR3647034	no treatment		None	None	None
SRR3647035	no treatment		None	None	None

**Sample metrics**
Sample name	Raw read length	Trim read depth	Duplication proportion	Proportion reads mapped	Exon/intron ratio	Unique read proportion	Sample QC score	Sample NRO score
SRR3647033	75	16,705,774	0.68052	0.586	1.68114	0.32732	3	1
SRR3647034	75	44,622,866	0.83179	0.6138	1.4284	0.20296	4	1
SRR3647035	75	50,222,689	0.79085	0.6337	1.56037	0.27267	3	1

**Bidirectionals**
Sample name	Tfit total bidirs	Tfit promoter bidirs	Tfit intronic bidirs	Tfit intergenic bidirs	dREG total bidirs	dREG promoter bidirs	dREG intronic bidirs	dREG intergenic bidirs
SRR3647033	None	None	None	None	None	None	None	None
SRR3647034	None	None	None	None	None	None	None	None
SRR3647035	None	None	None	None	None	None	None	None