SRR091798
Downloads
Gene read counts Bidirectional read counts Tfit regions dREG regions
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Technical details
Sample name Sample ID Paper identifier Protocol Library prep Control/Experimental Wildtype & Untreated QC score Replicate
SRR091798 1067 Ji2011transcriptional GRO-seq ligation control True 2 1
Cellular details
Sample name Organism Sample type Cell type Clone/Individual Strain Genotype Construct
SRR091798 M. musculus cell line C2C12
Conditions
Sample name Condition type Treatment Start time End time Duration
SRR091798 no treatment None None None
Sample metrics
Sample name Raw read length Trim read depth Duplication proportion Proportion reads mapped Exon/intron ratio Unique read proportion Sample QC score Sample NRO score
SRR091798 76 16,834,558 0.30411 0.7763 2.33713 0.7219 2 1
Bidirectionals
Sample name Tfit total bidirs Tfit promoter bidirs Tfit intronic bidirs Tfit intergenic bidirs dREG total bidirs dREG promoter bidirs dREG intronic bidirs dREG intergenic bidirs
SRR091798 26559 6858 11502 5081 8906 3274 3249 1821
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