DBNascent | Samples

SRR6008469,SRR6008470

**Downloads**
Gene read counts	Bidirectional read counts	Tfit regions	dREG regions
ZIP archive	ZIP archive	ZIP archive	ZIP archive
For TDF visualization files please see individual sample downloads or dataset pages for prebuilt ZIP archives.

**Technical details**
Sample name	Sample ID	Paper identifier	Protocol	Library prep	Control/Experimental	Wildtype & Untreated	QC score	Replicate
SRR6008469	1398	Kuosmanen2018nrf2	GRO-seq	circularization	control	True	2	1
SRR6008470	1399	Kuosmanen2018nrf2	GRO-seq	circularization	experimental	False	3	1

**Cellular details**
Sample name	Organism	Sample type	Cell type	Clone/Individual	Strain	Genotype	Construct
SRR6008469	H. sapiens	primary cell	HUVEC
SRR6008470	H. sapiens	primary cell	HUVEC

**Conditions**
Sample name	Condition type	Treatment	Start time	End time	Duration
SRR6008469	no treatment		None	None	None
SRR6008470	treatment	oxPAPC (30 microg/mL)	-6 hr	0 hr	6 hr

**Sample metrics**
Sample name	Raw read length	Trim read depth	Duplication proportion	Proportion reads mapped	Exon/intron ratio	Unique read proportion	Sample QC score	Sample NRO score
SRR6008469	51	15,014,124	0.30981	0.931	1.65025	0.72448	2	1
SRR6008470	51	12,410,810	0.31957	0.9229	2.44444	0.69136	3	1

**Bidirectionals**
Sample name	Tfit total bidirs	Tfit promoter bidirs	Tfit intronic bidirs	Tfit intergenic bidirs	dREG total bidirs	dREG promoter bidirs	dREG intronic bidirs	dREG intergenic bidirs
SRR6008469	27669	8320	12417	6580	17317	6700	6750	4064
SRR6008470	24144	9702	10409	4348	16626	7630	6494	2763