SRR5087852
Downloads
Gene read counts Bidirectional read counts Tfit regions dREG regions
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Technical details
Sample name Sample ID Paper identifier Protocol Library prep Control/Experimental Wildtype & Untreated QC score Replicate
SRR5087852 1406 Kwon2017locus GRO-seq not noted in GEO or publication control True 3 1
Cellular details
Sample name Organism Sample type Cell type Clone/Individual Strain Genotype Construct
SRR5087852 M. musculus cell line N2a
Conditions
Sample name Condition type Treatment Start time End time Duration
SRR5087852 no treatment None None None
Sample metrics
Sample name Raw read length Trim read depth Duplication proportion Proportion reads mapped Exon/intron ratio Unique read proportion Sample QC score Sample NRO score
SRR5087852 50 10,837,014 0.53595 0.8205 2.62983 0.43574 3 1
Bidirectionals
Sample name Tfit total bidirs Tfit promoter bidirs Tfit intronic bidirs Tfit intergenic bidirs dREG total bidirs dREG promoter bidirs dREG intronic bidirs dREG intergenic bidirs
SRR5087852 29236 7256 8947 10203 19289 6719 4594 6385
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