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SRR514959
Gene read counts | Bidirectional read counts | Tfit regions | dREG regions |
ZIP archive | ZIP archive | ZIP archive | ZIP archive |
For TDF visualization files please see individual sample downloads or dataset pages for prebuilt ZIP archives. |
Sample name | Sample ID | Paper identifier | Protocol | Library prep | Control/Experimental | Wildtype & Untreated | QC score | Replicate |
SRR514959 | 2238 | Schoeberl2012biased | GRO-seq | ligation | experimental | False | 5 | 1 |
Sample name | Organism | Sample type | Cell type | Clone/Individual | Strain | Genotype | Construct |
SRR514959 | T. thermophila | tissue | micronucleus | B2086 x CU428 |
Sample name | Condition type | Treatment | Start time | End time | Duration |
SRR514959 | treatment | mating | -2 hr | 0 hr | 2 hr |
Sample name | Raw read length | Trim read depth | Duplication proportion | Proportion reads mapped | Exon/intron ratio | Unique read proportion | Sample QC score | Sample NRO score |
SRR514959 | 50 | 93,716,865 | 0.9964 | 0.7263 | 0.96067 | 0.01987 | 5 | 1 |
Sample name | Tfit total bidirs | Tfit promoter bidirs | Tfit intronic bidirs | Tfit intergenic bidirs | dREG total bidirs | dREG promoter bidirs | dREG intronic bidirs | dREG intergenic bidirs |
SRR514959 | None | None | None | None | None | None | None | None |