SRR1732573
Downloads
Gene read counts Bidirectional read counts Tfit regions dREG regions
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Technical details
Sample name Sample ID Paper identifier Protocol Library prep Control/Experimental Wildtype & Untreated QC score Replicate
SRR1732573 2314 Soccio2015genetic GRO-seq not noted in GEO or publication control False 3 1
Cellular details
Sample name Organism Sample type Cell type Clone/Individual Strain Genotype Construct
SRR1732573 M. musculus tissue epididymal white adipose tissue C57BL/6
Conditions
Sample name Condition type Treatment Start time End time Duration
SRR1732573 treatment low fat diet -28 day 0 day 28 day
Sample metrics
Sample name Raw read length Trim read depth Duplication proportion Proportion reads mapped Exon/intron ratio Unique read proportion Sample QC score Sample NRO score
SRR1732573 50 66,901,211 0.74612 0.349 2.69032 0.41557 3 1
Bidirectionals
Sample name Tfit total bidirs Tfit promoter bidirs Tfit intronic bidirs Tfit intergenic bidirs dREG total bidirs dREG promoter bidirs dREG intronic bidirs dREG intergenic bidirs
SRR1732573 15654 4927 6003 2858 18415 8585 5789 3121
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