DBNascent | Samples

SRR1168364,SRR1168365

**Downloads**
Gene read counts	Bidirectional read counts	Tfit regions	dREG regions
ZIP archive	ZIP archive	ZIP archive	ZIP archive
For TDF visualization files please see individual sample downloads or dataset pages for prebuilt ZIP archives.

**Technical details**
Sample name	Sample ID	Paper identifier	Protocol	Library prep	Control/Experimental	Wildtype & Untreated	QC score	Replicate
SRR1168364	2780	Zhang2019arerg	GRO-seq	ligation	control	True	3	1
SRR1168365	2781	Zhang2019arerg	GRO-seq	ligation	experimental	False	1	1

**Cellular details**
Sample name	Organism	Sample type	Cell type	Clone/Individual	Strain	Genotype	Construct
SRR1168364	H. sapiens	cell line	VCaP
SRR1168365	H. sapiens	cell line	VCaP

**Conditions**
Sample name	Condition type	Treatment	Start time	End time	Duration
SRR1168364	no treatment		None	None	None
SRR1168365	treatment	dihydrotestosterone (100 nM)	-2 hr	0 hr	2 hr

**Sample metrics**
Sample name	Raw read length	Trim read depth	Duplication proportion	Proportion reads mapped	Exon/intron ratio	Unique read proportion	Sample QC score	Sample NRO score
SRR1168364	36	32,938,098	0.66134	0.8097	1.72551	0.54665	3	1
SRR1168365	36	29,727,405	0.37555	0.8278	1.48863	0.73187	1	1

**Bidirectionals**
Sample name	Tfit total bidirs	Tfit promoter bidirs	Tfit intronic bidirs	Tfit intergenic bidirs	dREG total bidirs	dREG promoter bidirs	dREG intronic bidirs	dREG intergenic bidirs
SRR1168364	24427	6817	12002	4688	16029	6263	6589	3322
SRR1168365	31239	8337	15541	6271	19486	6479	8750	4306