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Blumberg2021characterizing
| SRR12083664 |
| SRR12083665 |
| All metadata | TXT | 3 Kb |
| TDFs (visualization files) | ZIP archive | 315 Mb |
| Read counts and bidirectional calls | ZIP archive | 16 Mb |
| SRP accession | SRP268709 |
| GEO accession | GSE153200 |
| Protocol | PRO-seq |
| Organisms | H. sapiens |
| Library Prep | ligation |
| Spike-in | |
| Published | Yes |
| Year | 2021 |
| First Author | Blumberg |
| Last Author | Siepel |
| DOI | 10.1186/s12915-021-00949-x |
| Full citation | Amit Blumberg, Yixin Zhao, Yi-Fei Huang, Noah Dukler, Edward J. Rice, Alexandra G. Chivu, Katie Krumholz, Charles G. Danko, and Adam Siepel. Characterizing RNA stability genome-wide through combined analysis of PRO-seq and RNA-seq data. BMC Biology, 19(1):30, Feb 2021. |
|
Median QC score
|
1.0 |
| ATAC-seq? | No |
| RNA-seq? | Yes |
| ChIP-seq? | No |
| 3D Seq? | No |
| Other Seq? | No |