Chen2015paf1
Downloads (all samples in dataset)
All metadata TXT 8 Kb
TDFs (visualization files) ZIP archive 1.0 Gb
Read counts and bidirectional calls ZIP archive 64 Mb
Paper Details
SRP accession SRP060227
GEO accession GSE70408
Protocol GRO-seq, RNA-seq variant
Organisms H. sapiens
Library Prep ligation
Spike-in
Published Yes
Year 2015
First Author Chen
Last Author Shilatifard
DOI 10.1016/j.cell.2015.07.042
Full citation Fei Xavier Chen, Ashley R. Woodfin, Alessandro Gardini, Ryan A. Rickels, Stacy A. Marshall, Edwin R. Smith, Ramin Shiekhattar, and Ali Shilatifard. PAF1, a molecular regulator of promoter-proximal pausing by RNA polymerase II. Cell, 162(5):1003-1015, Aug 2015.
Median QC score
Information
2.0
ATAC-seq? No
RNA-seq? Yes
ChIP-seq? Yes
3D Seq? No
Other Seq? No